| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4499 |
|---|
| Symbol | |
|---|
| ID | 5198307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4942465 |
|---|
| End bp | 4943349 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640584052 |
|---|
| Product | phosphomannose isomerase-like protein |
|---|
| Protein accession | YP_001264975 |
|---|
| Protein GI | 148557393 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1482] Phosphomannose isomerase |
|---|
| TIGRFAM ID | [TIGR00218] mannose-6-phosphate isomerase, class I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0945396 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCGGCCA CCATCCTCGC CAACCATCGG GTCGAAAAGC CGTGGGGCCG GCATGATCTC
GCGCCGCTGT TCCCGGATCA GCCGGCCGAC CGGCCGGCGG TGGGGGAAAT CTGGTACGAC
GATCCGTCGG CCCGCCCGCG CGAGCTGCTC GTCAAATATC TGTTCACCAG CGAGCGGCTG
TCGGTGCAGG TCCATCCCGA CGATGCGGCG GCGCAGGCGC GCGGCTTCGC GCGCGGCAAG
GACGAGGCCT GGATCATCCT GTCGGCCGAG CCCGATTCGA CGATCGCCCT CGGCCTGCGC
GAGCCGATGG AGCCCGGCGC TGTCCGCGCC GCGGCGCTCG ACGGTTCGAT CGAGGACATG
CTCGACTGGA AGCCGGTCCG CGCCGGGGAG GTGATCTACT CGCCGGCCGG CACGATCCAC
GCGATCGGCA AGGGACTCCG CCTCGTCGAG GTGCAGCAGA ATCTCGACCT CACCTATCGC
TTCTACGACT ATGGCTCGGC GCGCGAGCTG CATCTCGACG AGGCGATGGC GGTGGCCGAT
TTCGGCCCCT TCGCCGATCC CGCCGAACCG CGCGAGCACG GTCCCGGCCG CACGGTCCTC
GCCGACCGGC GCAAGTTCGT GCTCGAGCGC TGGACCATGG CGGGCGGCTT CGTCATCGCT
CCGGGCAGCG CGACGATCTG GGTGATGCCG GTCGCGGGCA GCGCCTCGAT CGACGGCAAG
GCGATCGAGC TGGGCGACAC GGTGATCGTC GAGGGCGCCG CGGCGATCGA CATCGCGCCC
GGCAGCACCC TTTACGCCGC TTATCCGGGG TTGAGGGTGA TCAACGGGTT GTTGGGATCG
GAATCGCGGT CGACCTCGGC CAGCGGGGCC GCCGTCACCG GATAG
|
|---|
| Protein sequence | MPATILANHR VEKPWGRHDL APLFPDQPAD RPAVGEIWYD DPSARPRELL VKYLFTSERL
SVQVHPDDAA AQARGFARGK DEAWIILSAE PDSTIALGLR EPMEPGAVRA AALDGSIEDM
LDWKPVRAGE VIYSPAGTIH AIGKGLRLVE VQQNLDLTYR FYDYGSAREL HLDEAMAVAD
FGPFADPAEP REHGPGRTVL ADRRKFVLER WTMAGGFVIA PGSATIWVMP VAGSASIDGK
AIELGDTVIV EGAAAIDIAP GSTLYAAYPG LRVINGLLGS ESRSTSASGA AVTG
|
|---|
| |