| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4496 |
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| Symbol | |
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| ID | 5198918 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4939296 |
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| End bp | 4941056 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640584049 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_001264972 |
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| Protein GI | 148557390 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.124467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTTGA ACCATGATGG CCATCGCGGA ACCGGGGTAA GTCCCCGCGT GGCCCTGCTC
TCGATCGTCG CCTTCTGGCT GGTCTATTTC GCCATCGCGA CGATCCGGTC CTACATGATC
GATTTCGGTC ACCAGACCGA GATGATGGCG GCGCGCGCCT TCGTCACGAT CGGATCGATG
ATCGCGACCT ATATCGTCTA CCTGGCGATG CGGCCGCTGA CCGGCAAGTC GCTGGCGGTC
AACGTGACCG CGGTGGCGCT GCTCGCGGCG CCGGCGGCGA TCGCCTACAG CTCGATGAAC
TGGATCGCCT TCCGCCAGTT CGACAAGCAG GTCGAGGCCG AGAAGGCGCG CGAGACGGCG
TCGCGCAAGA TCGTGATCGA CGACCGCAGC GTCGCCGCGG CGCGCGAGCA GGCGCAGGTC
GCCATCGCCG CCGCGCGCGA CGCGATCCGC GAGGCGACCG AACAGGCCAA GGCCGCCGCC
GAAGCCAAGG CGGCGGCGCA GCGCGAGGCG GCCGAGCGCG AGGCCGAGGT TCGAAGCGAG
ATCGAAAGGG CGCAGCGCGA GGCCAGCCAG AACGTCCGCG ACGCCACGCA GGAAGCGGAG
CAGGCGCGCC GCGAGGCGCA GCGCGAGGCC GACAGGGCCC GGCGCGACGC CTATCGCAGC
CAGCGCGAAG CCTATGTCGA GGCGATGGCC GACTATAAGG AGGGGCTGCG CGAGGCCAGG
CAGGCCGTCG AGGAAGCCCG CCGCCACGGC GTGAACATCG ACATCGACAG CATCCTGGCG
AGCGTCCCGC CCCTGCCGAC GCCGCCGACG CCCCCCTCCC CCGCGACGCC GCCCGCGCCG
TCTGCACCCG GCGCGACGAA GGCGCCGCCA TCGCCGCCGG CCCCGCCCCG CGCGCCGGTC
AGGATCGAGA TCCCCAAGCC GATCACCATC CCGACCCCGG TGATCAGCGA GCCGACCCCC
GGCACGGTGA TGATCCAGGT CGGCCCGCCG ACCGAGCCCT ATGACAAGAA GAAGGAGGTC
GGCGTCGTCA GCCAGATCGC CGACCAGGCG CTCAACGGCT ATTTCTTCTT CGCGGCGTGG
GGCGCGCTGT TCCTCGCGCT CAGCTATGCC GCCGCGGTGC GATCGGCCGA GCGGGAGGCC
GCCGGCTATC GCGCCGCCGC CCGCGACGCC GAGCTGCGGG CGCTGCGCTA CCAGGTCAAT
CCGCACTTCC TGTTCAACAC GCTCAACTCG CTGTCGACGC TGATCCTGAA GGATCATCGC
GACGAGGCGG AGAAGATGAT CCTCAACCTG TCGACCTTCT TCCGCACCAG CCTGACCGCC
GATCCGACCG AGGACGTGGT GCTGGCCGAG GAGATACGGT TGCAGCGCCT CTACCTCGAC
ATCGAGGCGA TCCGCTTCCC CGACCGGCTG ATCGTCGACA TCAGGGTGCC GCAGGAGCTG
ACCGACGCGC GCGTGCCCTG CCTGATCCTC CAGCCGCTGG TCGAGAATGC GATCAAATAT
GGCGTCTCGC GCGCGAAGCG GCCGGTCACG CTGCTGATCA CCGCCCGCCA GGATTCGGAA
GGGCTGGTGC TGAGCGTCGA GGACGACGGC GAGCCGCTGG GCGAGGACCA GCAGCTGCGC
GGCACCGGCG TCGGACTGAA GAACGTCGCC GACCGGCTGA AGGCGCGCTT CGGCGGCGAT
GCCGCCTGTC GCTACGGGCC GCTTCCCAAT GGTGGTTTTG GCGTGACGCT TTTCATGCCA
TTGATCAGGG ATGACGTCTG A
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| Protein sequence | MTLNHDGHRG TGVSPRVALL SIVAFWLVYF AIATIRSYMI DFGHQTEMMA ARAFVTIGSM
IATYIVYLAM RPLTGKSLAV NVTAVALLAA PAAIAYSSMN WIAFRQFDKQ VEAEKARETA
SRKIVIDDRS VAAAREQAQV AIAAARDAIR EATEQAKAAA EAKAAAQREA AEREAEVRSE
IERAQREASQ NVRDATQEAE QARREAQREA DRARRDAYRS QREAYVEAMA DYKEGLREAR
QAVEEARRHG VNIDIDSILA SVPPLPTPPT PPSPATPPAP SAPGATKAPP SPPAPPRAPV
RIEIPKPITI PTPVISEPTP GTVMIQVGPP TEPYDKKKEV GVVSQIADQA LNGYFFFAAW
GALFLALSYA AAVRSAEREA AGYRAAARDA ELRALRYQVN PHFLFNTLNS LSTLILKDHR
DEAEKMILNL STFFRTSLTA DPTEDVVLAE EIRLQRLYLD IEAIRFPDRL IVDIRVPQEL
TDARVPCLIL QPLVENAIKY GVSRAKRPVT LLITARQDSE GLVLSVEDDG EPLGEDQQLR
GTGVGLKNVA DRLKARFGGD AACRYGPLPN GGFGVTLFMP LIRDDV
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