| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4483 |
|---|
| Symbol | |
|---|
| ID | 5198414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4929564 |
|---|
| End bp | 4930349 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640584036 |
|---|
| Product | F0F1 ATP synthase subunit A |
|---|
| Protein accession | YP_001264959 |
|---|
| Protein GI | 148557377 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.639337 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGCCG AATCGGGCAA GATCGATCCG ATGCACCAGT TCATGATCGA ACCGCTGTTC
GGTCAGGGCT GGTCGATTGC AGGCCATAAC ATCGCTTTCA CCAACTCGGC GATGTGGATG
GTGGTGACGC TCGCGGCGCT GCTGATCTTC ATGATCGGCG GCATGAAGCG CGATCTGGTC
CCCGGCCGCT GGCAGGCCGC GGTGGAGAGC TTCACCGGCT TCGTCGCCGG CATGATGGCG
ACGAACATCG GACCCGAGGG CAAGAAGTTC ACCCCCTATG TCTTCTCGCT GTTCATGTTC
ATCCTGATCG CGAACATCAT GGGCATGATG CCCACCGGCG TCGTCGGCGT TCACCCCTTC
ACCGTGACCA GCCACCTGAC GGTCACCGGC GTGCTCGCCG TGATCAGCTT CTCGATCGTG
CTGGTCGTCG GCTTCTGGCG CCACGGCTTC CATTTCTTCT CGCTGTTCGT GCCGCACGGC
ACGCCCGGCT ACATGATCCC GATGATCTTC GTCATCGAGC TGTTCTCCTT CCTCATCCGT
CCCTTTTCGC TGGGCCTGCG ACTGTTCGTC GCGATGACCG CGGGGCACAT CCTGATGAAG
GTGCTCGCCG GCTTCGTGAT CAACGGCATC AACGCCGGCG CGCTGACCGT CGCGATCGTC
TCGATCCCCA GCTTCATCCT GATGATCGGC ATCACCCTGC TCGAACTGCT GGTGTGCGCC
ATCCAGGCCT ATGTGTTCGC GCTGCTGACG TCGCTGTACC TCAACGACGC GATCAACCTG
CACTGA
|
|---|
| Protein sequence | MAAESGKIDP MHQFMIEPLF GQGWSIAGHN IAFTNSAMWM VVTLAALLIF MIGGMKRDLV
PGRWQAAVES FTGFVAGMMA TNIGPEGKKF TPYVFSLFMF ILIANIMGMM PTGVVGVHPF
TVTSHLTVTG VLAVISFSIV LVVGFWRHGF HFFSLFVPHG TPGYMIPMIF VIELFSFLIR
PFSLGLRLFV AMTAGHILMK VLAGFVINGI NAGALTVAIV SIPSFILMIG ITLLELLVCA
IQAYVFALLT SLYLNDAINL H
|
|---|
| |