| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4477 |
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| Symbol | |
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| ID | 5196677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4921140 |
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| End bp | 4922144 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640584030 |
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| Product | KpsF/GutQ family protein |
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| Protein accession | YP_001264953 |
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| Protein GI | 148557371 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0794] Predicted sugar phosphate isomerase involved in capsule formation |
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| TIGRFAM ID | [TIGR00393] KpsF/GutQ family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.382175 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAGG CTAGGGATAT CCGCGCGAAG GTTCCCGCCG CCAGCCGCCA GCGCATTCTC
GACCAGGGAC GCGAGGTGCT GGGAGTCGAG GCCCAGGCGC TAACGCTGCA GCGTGATGCG
CTCGATGAGG ATTTCGCGCG GGCCGTCGAG CTGATCCTGG CCACGCAGGG ACGCGTGGTG
GTCAGCGGCA TGGGGAAATC GGGCCATATC GCCCGCAAGA TGGCGGCGAC CTTCGCGTCG
ACCGGAACGC CGGCGATCTT CGTCCATCCG GGCGAAGCCG CGCATGGCGA TCTGGGGATG
TTGCTGGCTG GAGATCTGCT GGTCGTACTC TCCAATTCGG GGGCGACGCC CGAGCTCGGC
CCGATCATGA CCTATGCGCG CGACCTCGGC TGCCCGATCG TCGCGATCAG CGCCCAGCGG
CATTCGCCGA TGGCGCGGCT CGCCAGCGCG GCGATCATCC TGCCCAAGGT GCGCGAGACC
TGCCCGGTCA ACATCTCGCC CACCACGTCG ACGACGCTGA TGCTCGCGCT CGGCGATGCA
TTGGCGGTGG CGACCATGTC GATGCGAGGG ATCACGCGCG CGGAGCTCGA GCGGCTGCAT
CCGGGCGGCC ATATCGGCCT GCGCCTGCTG CCGATCAACG ACATCATGCA TGTCGGCGAT
CGGCTGCCGC TCGTCGTGGC GACCACGCCG ATGCGCGAGG TACTGCTCAT CATGACCGAG
AAGAGCCTGG GGATTGCGGG GGTGCTCGAC GGCGACGGCC GGCTGGTCGG CACCGTCACC
GACGGCGACC TGCGACGCAA CATCGACCGG CTGCTGAACA GCGTGGCGGG CGACGTGATG
ACCCGCCATC CGAAGACAGT ACCCGACGGC ACCTATGCCG AGGACGCCAA GGCGATCCTG
GCCGCGAACA AGATCACCGC CCTGTTCGTG ATGGATCATG ATCGGCCCGA CACGCCGATC
GGCCTGATCC ACATCCACGA TTTCAACCGG ATCGGCATGA ACTGA
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| Protein sequence | MYQARDIRAK VPAASRQRIL DQGREVLGVE AQALTLQRDA LDEDFARAVE LILATQGRVV
VSGMGKSGHI ARKMAATFAS TGTPAIFVHP GEAAHGDLGM LLAGDLLVVL SNSGATPELG
PIMTYARDLG CPIVAISAQR HSPMARLASA AIILPKVRET CPVNISPTTS TTLMLALGDA
LAVATMSMRG ITRAELERLH PGGHIGLRLL PINDIMHVGD RLPLVVATTP MREVLLIMTE
KSLGIAGVLD GDGRLVGTVT DGDLRRNIDR LLNSVAGDVM TRHPKTVPDG TYAEDAKAIL
AANKITALFV MDHDRPDTPI GLIHIHDFNR IGMN
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