Gene Swit_4471 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4471 
Symbol 
ID5198562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4915747 
End bp4916259 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content62% 
IMG OID640584024 
Producthypothetical protein 
Protein accessionYP_001264947 
Protein GI148557365 
COG category[S] Function unknown 
COG ID[COG5465] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.39855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTGG ACGACTTTGA ATCCGCGCGC GACGCCAGCG CGCCCATCGA CATGCTCGAG 
CATTATTTCG CGGCTCGCGG CTGGGACTAT CAGCGTGCCG GAGACGAGGA GATCGTTGCC
CAGTTCCAGG GCAGCTGGGC GCAGTATGAG CTGAGGGCGG TGTGGCGCGA GGAGGATCGC
GTCCTGCAGT TTCTCGCCCT TCCGGACATC CGGGTCACCG CCGACAAGCG GACCGCGATG
TACGAGACGA TTGGCCTGAT CAACGAGCAA CTCTGGCTTG GCCATTTCGA GATGTGGACC
AGTTCGTCGA TGGTACTGTT CCGCCATGCC GCGCTGCTGG AGAACCAGGC TGGCGATGCG
ATCCTGACGC TCGAGCAGGC GGAAACGCTG ATCGAGACGG GGATCGATGA ATGCGAGCGC
TTCTATCCGG TTTTCCAGTT TGTCCTATGG AGCGACAAAT CTCCGCAGGA AGCGATCGCC
GCTGCGATGA TCGACACCCA AGGCGAGGCC TGA
 
Protein sequence
MDVDDFESAR DASAPIDMLE HYFAARGWDY QRAGDEEIVA QFQGSWAQYE LRAVWREEDR 
VLQFLALPDI RVTADKRTAM YETIGLINEQ LWLGHFEMWT SSSMVLFRHA ALLENQAGDA
ILTLEQAETL IETGIDECER FYPVFQFVLW SDKSPQEAIA AAMIDTQGEA