Gene Swit_4466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4466 
Symbol 
ID5198074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4912226 
End bp4913491 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content58% 
IMG OID640584018 
Producthypothetical protein 
Protein accessionYP_001264942 
Protein GI148557360 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.66105 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCTG ATTTCCATTC CCGTCCGTTC GCGCGGTTGC GCAAGCCGGA GCTTCGCCTT 
GGGCTGGGGC TTGGAGTATT GGCTGGTGGT TCGAATAGTG GGCCTGCAGT GACGTTTGAT
TTCCTAGCCG AAAGCACCTT TGATAGCCGC ATAGCCTTCA CGCGAGGTTC GGCGGCGACG
CGTGTCAATG CTGCGGGAAT AATCGAGGTA GTCGGTAATA ATGTACCGCG CTTCGATTAT
GATCCGGTCA CGCTCGAAAT GCGAGGTTTG CTGATCGAGG AGCCGCGGAC GAACTATCTT
ATCCAGAGCG AATTTGCGAC AGGCCTGCCG GCGTCCAGGG GCGGGCTGGT CAGCACTACG
ACTTTCTCAG GTTTGATCGG AGCGACGGGT ATCGCCTTTG GTTACGATGG CACCGCGTCG
TCATATTTCT ATGTAACGAA CTATGCAGTC CCGGCGAACA GTTTGCGTGT GATCAGCGTG
TTTGTTCGGA TGGATGATGG CGGCGCTCCC GTTTTCGGGA ATAATGCCGG CCAGCATCCT
GATAACGATT TCACATTGAA TCTCGGGGGA ACGGTGCTTG CCCCGACGAT CGCGAACAGC
GGGAAAGTGG AGAACTATGG AGGGGGTCTT TATCGCGTCA GCCTGGCGAT CAGTACCAGT
GCCTCTCCTA GCTCGAATTG CGGGGTGGTC AAATATACTG CCAACAGCGT TCGGACTTTC
AAGGTCAGCG GGATCATGGT CGAGGCCGGG ACGGATGTCA CTTCATACAT CCCAACAACC
ACGGCGCAGG TGACCCGGGC AGCTGATGTA GCGGTCGTTT CGGGGACGAG CTTCGCGGGT
TGGTATAATC AGGCGGCGGG ATCGGTCATC GTCGCCTTCG ATCGCAATCC GGCCATTGAC
GGTACGGATC GGGGTGCCAT CAGCTTGGAC GTTGGCTCGG CAAGCAGCCG GATGGTCCTG
TATAGCTCGA CGGTGGGTCG AATGCTCGGA GCGTCGAGTG GCACCACCAT CTTCTCCTTT
ATCAATCTGG GCTCGATGAT CGCGGGAACG CGATATTCGA TGGCGCTGGC CTATGCGCTC
GACGACTTTG CCGCATGCAT GAGCGGTGGT ACGCTCTCCA CGGATAGCAG CGGAATGCCG
CCAACGGCCA GCCAGATGAC GATTGGCGGA GGGCCAGGTA CGTCGGCCCT TAACGGCCAT
ATCCGTTCCG TCACTTATTA TAATCGTCGC CTTCCCAACG CTGATCTTCA GAGGCTTACC
GCATGA
 
Protein sequence
MIPDFHSRPF ARLRKPELRL GLGLGVLAGG SNSGPAVTFD FLAESTFDSR IAFTRGSAAT 
RVNAAGIIEV VGNNVPRFDY DPVTLEMRGL LIEEPRTNYL IQSEFATGLP ASRGGLVSTT
TFSGLIGATG IAFGYDGTAS SYFYVTNYAV PANSLRVISV FVRMDDGGAP VFGNNAGQHP
DNDFTLNLGG TVLAPTIANS GKVENYGGGL YRVSLAISTS ASPSSNCGVV KYTANSVRTF
KVSGIMVEAG TDVTSYIPTT TAQVTRAADV AVVSGTSFAG WYNQAAGSVI VAFDRNPAID
GTDRGAISLD VGSASSRMVL YSSTVGRMLG ASSGTTIFSF INLGSMIAGT RYSMALAYAL
DDFAACMSGG TLSTDSSGMP PTASQMTIGG GPGTSALNGH IRSVTYYNRR LPNADLQRLT
A