Gene Swit_4464 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4464 
Symbol 
ID5198072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4911158 
End bp4911598 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content61% 
IMG OID640584016 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001264940 
Protein GI148557358 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CGGCATATAT GGACCCGGCG AAGATCGAGT ATCTTACGAT CCACTGCGCT 
GCGACACCGC GTGGGCGTGA CGTGAAGGCT GCAACGATCA GTCAATGGGA TGTCCGGAAG
TTCGGACAGA TATCCTACCA CCACGTGGTC GAGATCGACG GAAACAGGGT GCGGACCTTG
CGGGACGATC AGCGCGGCGC GCATGTCGGG GGCGCCAACA CCGGCAATAT CGGCATCTGC
TATGTCGGCG GGGTCGAGGC GAACAACAGG CCGGCCGACA CGCGGACGGA TGCTCAGAAG
ATGGCGTTGC TGACGCTGAT CCGAACTTAT AGGGCGCGCT ATCCCGGCAT CATCATTCGC
GGGCATCGTG ACTGGCCGGG CGTGGCGAAA GCTTGTCCGA GTTTCGATGT CGCCGCCTGG
CTGAAGGAGG TCGGCGAATG A
 
Protein sequence
MTTPAYMDPA KIEYLTIHCA ATPRGRDVKA ATISQWDVRK FGQISYHHVV EIDGNRVRTL 
RDDQRGAHVG GANTGNIGIC YVGGVEANNR PADTRTDAQK MALLTLIRTY RARYPGIIIR
GHRDWPGVAK ACPSFDVAAW LKEVGE