| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4450 |
|---|
| Symbol | |
|---|
| ID | 5199140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4898737 |
|---|
| End bp | 4899711 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640584002 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001264926 |
|---|
| Protein GI | 148557344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.585946 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGAC CCAAATCCTT GCCGAAGATG CTGTTCGAAG AGGACTATGC GCGGCGATTG
GAACAGGAGC GCGACGCTGC CGCTTTTGCG GAAGGGCGGG ATGTGCCGGA GATCGTGGTG
AACGGGCGCA GACCGTCAGG CGAGCCGGTG AAGAGCGGAA AGGGCTTCCT GGAGCGGATC
GACGACTTGT TCGATACCAA TTTGAGCGGG ATGAATCCTC ATCGCACGTC CGCGGCGAGG
CAAGGCCCTT CCGATCAGGG GCCGGTCGAC TGGAAGATGG CGCGCTATGA TCTGGGGCCT
GCGCCGGGCC TGGCGGAGAC CTATTCCTAT GGCGGCAGGA GCTATCCCTC GTTCGAGGCG
GCACAGGCCG CTCATCCGGA CATGCCGCTG ATCGGCAATC CGCCAAGCGT GGCGAGCGAA
TATGCGGCGC GGCGGGACAA GGCGTTTCTC GACAGCATCG GATCGGGCGC GCTGGGCCTT
GGTCCGATGT CCTATGTGAT GGGCGGTTCG CCTGAAACCA TCCAGGCGAG TACGCAGTTC
GATGAGGCGT TGGGTGGCCT TGCGGCGGGA ACTGGATTTC GGCCTGCTAG CCGAACAAGG
CTTCCGCTAC CGAATGCCGA GGCCCCGATG CGCGAGTTCA AGAAATGGCC TAGCAATAAT
GGTTTTCTTT ATTCTCTCAA AGGAGAGATC CCTGTGAAAT ACCGGTTCGA CCGATATGGG
GACGAAGGAA GATTAGGTGA TAAGGATGAC GCGGGGAGAT TTACGGCTCC CCTTGGTACG
CCCTATGAAC AACGTGCGGT CGGTCACCGG CCAGATGATC AGGCTTATCA CGCGTATGAG
AGTATGGTTG GATTGCCTGT CGAAGGGGGG CCTGCTGTAC CATGGCTTGG TCAACCAGGA
GGTGCTTGGC AGTTCAGGCA TCCCGAGAAT ATGACAACGA TGCTGGCAAA CGGGAAGATT
CGGCGCCTGC GCTAA
|
|---|
| Protein sequence | MSGPKSLPKM LFEEDYARRL EQERDAAAFA EGRDVPEIVV NGRRPSGEPV KSGKGFLERI
DDLFDTNLSG MNPHRTSAAR QGPSDQGPVD WKMARYDLGP APGLAETYSY GGRSYPSFEA
AQAAHPDMPL IGNPPSVASE YAARRDKAFL DSIGSGALGL GPMSYVMGGS PETIQASTQF
DEALGGLAAG TGFRPASRTR LPLPNAEAPM REFKKWPSNN GFLYSLKGEI PVKYRFDRYG
DEGRLGDKDD AGRFTAPLGT PYEQRAVGHR PDDQAYHAYE SMVGLPVEGG PAVPWLGQPG
GAWQFRHPEN MTTMLANGKI RRLR
|
|---|
| |