Gene Swit_4431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4431 
Symbol 
ID5198394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4879508 
End bp4880002 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content70% 
IMG OID640583983 
ProductNUDIX hydrolase 
Protein accessionYP_001264907 
Protein GI148557325 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG4119] Predicted NTP pyrophosphohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGA GGAGTGCCGG CCTGCTGATC TTCCGCAGAC GCGGCGGAGC GATCGAGGTG 
CTGCTCGTCC ATCCCGGCGG ACCCTATTGG CGCAACAAGG ACGCCGGCAC CTGGCAGATT
TCCAAGGGCC TGATCGAGCC GGGCGAGGAC GCCGTCTCGG CGGCGCGACG CGAGGCGGGG
GAGGAACTGG GCGTGGCGAT CGCGGGCGAT GCGGCGCCAC TCGGCGAGAT ACGGCAGGCG
GGCGGCAAGA TCGTCGAGGC CTTCGCGATC GAGGCCGATA TCGACCCGGC GGCGGTGCAC
AGCAACAGCT TCGAGATGGA ATGGCCGCCG CGAAGCGGAC GGATGCGGAG CTTTCCGGAG
GTCGACGCGG CGCGCTGGTT CGGGATCGAC GAGGCGCGCG GCATGATGCT CGCCAGCCAA
CGGGAGTTGC TCGACCGCCT GTCGGACGTC GCCGCGACGC TCAGTTCGCC AGCGCGAGCG
AGATCGCCGC GGTGA
 
Protein sequence
MAQRSAGLLI FRRRGGAIEV LLVHPGGPYW RNKDAGTWQI SKGLIEPGED AVSAARREAG 
EELGVAIAGD AAPLGEIRQA GGKIVEAFAI EADIDPAAVH SNSFEMEWPP RSGRMRSFPE
VDAARWFGID EARGMMLASQ RELLDRLSDV AATLSSPARA RSPR