| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4431 |
|---|
| Symbol | |
|---|
| ID | 5198394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4879508 |
|---|
| End bp | 4880002 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640583983 |
|---|
| Product | NUDIX hydrolase |
|---|
| Protein accession | YP_001264907 |
|---|
| Protein GI | 148557325 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG4119] Predicted NTP pyrophosphohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCAGA GGAGTGCCGG CCTGCTGATC TTCCGCAGAC GCGGCGGAGC GATCGAGGTG
CTGCTCGTCC ATCCCGGCGG ACCCTATTGG CGCAACAAGG ACGCCGGCAC CTGGCAGATT
TCCAAGGGCC TGATCGAGCC GGGCGAGGAC GCCGTCTCGG CGGCGCGACG CGAGGCGGGG
GAGGAACTGG GCGTGGCGAT CGCGGGCGAT GCGGCGCCAC TCGGCGAGAT ACGGCAGGCG
GGCGGCAAGA TCGTCGAGGC CTTCGCGATC GAGGCCGATA TCGACCCGGC GGCGGTGCAC
AGCAACAGCT TCGAGATGGA ATGGCCGCCG CGAAGCGGAC GGATGCGGAG CTTTCCGGAG
GTCGACGCGG CGCGCTGGTT CGGGATCGAC GAGGCGCGCG GCATGATGCT CGCCAGCCAA
CGGGAGTTGC TCGACCGCCT GTCGGACGTC GCCGCGACGC TCAGTTCGCC AGCGCGAGCG
AGATCGCCGC GGTGA
|
|---|
| Protein sequence | MAQRSAGLLI FRRRGGAIEV LLVHPGGPYW RNKDAGTWQI SKGLIEPGED AVSAARREAG
EELGVAIAGD AAPLGEIRQA GGKIVEAFAI EADIDPAAVH SNSFEMEWPP RSGRMRSFPE
VDAARWFGID EARGMMLASQ RELLDRLSDV AATLSSPARA RSPR
|
|---|
| |