| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4411 |
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| Symbol | |
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| ID | 5200358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4860785 |
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| End bp | 4862197 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583963 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001264887 |
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| Protein GI | 148557305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.528194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.599577 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGGGT TCATGCGGCG CAAGCCAATC AACGGGGCGG AACGGCACGG CGACCGGCTG
CCGCCGACAT TGTCCTGGCC GCACCTGATG GCGCTCGGCG TCGGGGCGAT CGTCGGGACG
GGCATCCTGA CGCTGATCGG CGTCGGCGCC GACCGCGCCG GCCCCTCGGT GCTGCTCTCC
TTCGCGATCG CCGGGGCGGT GTGCGCCTGC GCGGCGCTGG CCTATGCCGA GCTGGCGGCG
ATGATGCCGG CGGCCGGCAG CGCCTATAGC TACAGCTATG CGGCGCTGGG CGAGATCATC
GCCTGGGTGG TCGGGTGGAG CCTGATCCTC GAATATTCGC TGGTCGTGTC GACGGTCGCG
GTCGGCTGGT CGGGCTATGC ATCGCCCCTG CTGGCCGGAT TCGGCTTTCC CGTCGAGCTG
ACGCAGGGGC CCGAGCTGGG CGGGCTGGTC AACCTTCCCG CCATCTTCAT CATCGCGGTG
GTGACCGGCC TGCTGCTGCT CGGCACGCGG GAGAGCGCGC GGGTCAACAC CGTGCTGGTG
ATCGTGAAGA TCGCCACGCT GTCGCTGTTC GTCGCGGTCG CGCTGCCGCA TTTCGAGGCC
GCGCATCTCA ACCCGTTCAT GCCTTATGGC TTCGGTTCGA CCCCCGGGCC GGACGGTGTC
CAGCGCGGCG TGATGGCGGC GGCCGCGATC ATCTTCTTCG CCTTCTACGG CTTCGACGCG
ATCTCGACCG CGGCCGAGGA GACCAAGCGG CCCGAACGCG ACCTGGCGAT CGGCATCGTC
GGATCGATGC TGGTCTGCAC GCTGATCTAC GTCCTGGTCG CCGCCGCGGC GATCGGCGCC
GTTCCCTTCG CGGGCTTCGC CGACAGCCCC GAGCCGCTGG CGCTGATCCT GCGCGAGTTG
GGGCGTCCCG GGGTCGCGCA TGTCGTCGCG ACCGCCGCGG TGATCGCGCT GCCGACGGTG
CTGCTCGCCT TCCTCTACGG ACAGAGCCGG ATCTTCCTGG CGATGGCGCG CGACGGCTTC
CTGCCCGGTT CGCTGGCGGC GATATCGAAG CGGGGAACGC CTGCGCGGAT CACGACCGCG
ACCGCGATCC TGGTCGCGAT CCTGGCCGGA CTGCTGCCGA TCGGCGAGAT CGCCGCGCTC
GCCAACGCCG GCACGCTGAT CGCGTTCATG GCGGTGGGGG CCTGCCTGAT CGTGCTGCGG
CGCAGCCGGC CGGACCTGCC GCGCCCGTTC CGCGCCCCGG CCGCGCTGGC GGTAGGCCTC
GGCGCGGTGC TCGGCTGCCT CTATCTGTTC ACCAGCCTGC CGGCCAAGAC GCTGCTCTGG
TGCCTGGGGT GGAACCTCGT CGGGCTGCTC ATCTATCTCG GCTATGCGCG CCACCACAGC
CGGCTGGCGA AGGCGGCGCA GGAGGCCGGC TGA
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| Protein sequence | MTGFMRRKPI NGAERHGDRL PPTLSWPHLM ALGVGAIVGT GILTLIGVGA DRAGPSVLLS
FAIAGAVCAC AALAYAELAA MMPAAGSAYS YSYAALGEII AWVVGWSLIL EYSLVVSTVA
VGWSGYASPL LAGFGFPVEL TQGPELGGLV NLPAIFIIAV VTGLLLLGTR ESARVNTVLV
IVKIATLSLF VAVALPHFEA AHLNPFMPYG FGSTPGPDGV QRGVMAAAAI IFFAFYGFDA
ISTAAEETKR PERDLAIGIV GSMLVCTLIY VLVAAAAIGA VPFAGFADSP EPLALILREL
GRPGVAHVVA TAAVIALPTV LLAFLYGQSR IFLAMARDGF LPGSLAAISK RGTPARITTA
TAILVAILAG LLPIGEIAAL ANAGTLIAFM AVGACLIVLR RSRPDLPRPF RAPAALAVGL
GAVLGCLYLF TSLPAKTLLW CLGWNLVGLL IYLGYARHHS RLAKAAQEAG
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