Gene Swit_4407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4407 
Symbol 
ID5199925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4856383 
End bp4856991 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID640583959 
Producthypothetical protein 
Protein accessionYP_001264883 
Protein GI148557301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.386078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.797798 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGACGC GCCGGACGCT GGTCGCGGCG GCCCTCGCCC TGCCGGCCGC CTCCGCTTTC 
GCTCGCCCCC TGGGCTTGGC CGCCGCCGCG CCGATGATCG ATCCGCGCCT TGTCGGGCGC
GCCCTCGCCG CGCTGTTCCA CCATCATCGT TCGATCTGGT CGCGCGATAT GATCGCCATC
GCCGATTTCG GTCTCCCCTC TTCGGTTCCG CGCTTGTTCC TCGTCGATAT CCTGCGCGGC
ACGACGACCG CGCTGCTCGT CGCCCATGGC AAGGGGTCCG ATCCCGATCA TAGCGGCATG
CTCCAAAGCT TCTCCGACAT CGTCGGCTCC GCCGCCACTT CCGAGGGCGC CTATCTCACC
GGCGACGCCT ATGGGGGGGC CCACGGTCCG TCGCGCCGCC TGATCGGCCT CGATCCCGGC
AACGCCCATG CCGAGGAGCG CGCGATCGTG ATCCATTCCG CCTGGTACGC CAATCCCGAC
ATGGTCGCGA AACAGGGCAA GCTCGGCCGC AGCGACGGTT GCTTCGCGGT GGGAGAAGCG
GATATCGCGA CGGTCCTTGC CCGTCTCGGC AAGGGACGCC TGCTCTACGC CGGGAGGATC
GATGGCTGA
 
Protein sequence
MLTRRTLVAA ALALPAASAF ARPLGLAAAA PMIDPRLVGR ALAALFHHHR SIWSRDMIAI 
ADFGLPSSVP RLFLVDILRG TTTALLVAHG KGSDPDHSGM LQSFSDIVGS AATSEGAYLT
GDAYGGAHGP SRRLIGLDPG NAHAEERAIV IHSAWYANPD MVAKQGKLGR SDGCFAVGEA
DIATVLARLG KGRLLYAGRI DG