Gene Swit_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4397 
Symbol 
ID5200364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4849528 
End bp4849812 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content70% 
IMG OID640583949 
Producthypothetical protein 
Protein accessionYP_001264873 
Protein GI148557291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.531618 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACGA CCGATCCTCG CTGCTGGCTG TGCGGCCGTC CGCTCGGCCG GCGGATCGAA 
TGGCATCACC CGCATCCGAA AAGCCGGGGC GGGCGCGAGA CGGTGCCGCT CCACCCGATC
TGCCACCGCA CCATCCATGC CCATTTCAGC AATGCCGAAC TGGCGCGCCT TCCCGCCGAT
CCCGACCCGG TGCGCCGGCA TCCGGACGTC GCCCGCTTCC TGGCATGGAT CGCCGACAAG
CCCCCCGACT TCCACGCCCC GACCCGGACG ATCCGGCGTC GATGA
 
Protein sequence
MSTTDPRCWL CGRPLGRRIE WHHPHPKSRG GRETVPLHPI CHRTIHAHFS NAELARLPAD 
PDPVRRHPDV ARFLAWIADK PPDFHAPTRT IRRR