Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4393 |
Symbol | |
ID | 5200360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4845380 |
End bp | 4846732 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640583945 |
Product | amidase |
Protein accession | YP_001264869 |
Protein GI | 148557287 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.281674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGAAG CGTTCGATCT CGACGTCACC GAATTGGGCA GTCGCTATCG TGACCGGACG TTGTCGCCGG TCGAGGTCGA ACAGGGGCTG TCGGCGCGGA TTGCCCGGCT CGATCCGGAG CTGGGCGCCT TCACCGCGCT GGCGGGAGAG GAAGCACGGA CGGCGGCGCG GCAGGCGGAG GCCGAGCTCG CGGCCGGGAT CGATCGCGGC CCGCTGCACG GCGTCCCGGT GACGGTCAAG GACCTCTGCC TCACCCGCGA CATGCCGACC GCGGCGGGGC TGCGCGGCTT CGCGGAGCGG CTGCCGCGGC GCGACGCGGC GGTGGTGGCG CGGCTGCGCG AAGCGGGGGC GGTGCTGGTC GGCAAGACCT ATACGACGGC GGGCGCCTTC GTCGATCCGG CGGCGGACCG GCCCTTTCCG CGCCATCCGG GACGCGCGGA TATCTTTCCC GGGATGTCGT CGACCGGCGC CGGCGTGGCG GTGGCGGCGG GGCTCTGCTC GGTCGCGATC GGGACCGACA CCGGCGGGTC GATCCGGCTG CCGTCGATGT GTTGCGGGGT GAGCGGGTTC AAGCCGGCCT ATCGGCGGGT CGACGCCGAA GGCGTTTTCG AGTCCGCGCC GTCGCTCGAT CATGTCGGGC CGATCGCCCG CAGCGTCGCC GATCTGGCGG CGGCGATGAC GGCGATCGGG GAGGGTGAGA GCCCGCGCGC CCTCGTCACC GATCTCGCGG CTGTGCGGAT CGGCGTCGAT CGCCGCGCCC TGGAACTGAC CGGGCCGAAA AGCCGGGGTG CGATCGAGCG GGCGATCGGG CTGTTCGGCG AGCTCGGCGT GACGGCAGTC GAGGTGACGC TGCCGCCGGT CGCGGAGCTG CTGGCGGCGA CCGGCCGGTT GCAGGCGTGG GAGACGGCGG CGGTCCATGC CGCCTGGTAT CCGGCCCATC GCGGGGACTA TGGGCCGGGC CTCGCCGCGA CGATCGACCG GGGCCGGGCG ATGCAGGCCG GCGATCTCGA CGATTTCGAA GCGGTTCGGG CCGCCTATCG CCAGCAGCTC GACGCGCTGT TCGCCACGGT CGACCTGATC ATCCTGCCGG TGCTGACGAT CGACACGCCG ACGCTGGACG AATGGGAGGG GGCGATGCGG CAGGCGGACC CGCTGGGCGC GCGCTTCACC AAGCCGTTCA ACGTGACCGG CCACCCCGCG CTCGCGCTGC CCGGCGGCTT CGATGCGGAC GGCTTGCCGC TGGGCTTCCA GCTCGTCGCG CGGCCGGCGG ACGAAGCCTT CCTGCTCGGC GCCGGAGTCG CCTTCCAGAA GATCAGCGAC TGGCATCGGG GCCTGCCGCG CGCCCTGCCG TAG
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Protein sequence | MDEAFDLDVT ELGSRYRDRT LSPVEVEQGL SARIARLDPE LGAFTALAGE EARTAARQAE AELAAGIDRG PLHGVPVTVK DLCLTRDMPT AAGLRGFAER LPRRDAAVVA RLREAGAVLV GKTYTTAGAF VDPAADRPFP RHPGRADIFP GMSSTGAGVA VAAGLCSVAI GTDTGGSIRL PSMCCGVSGF KPAYRRVDAE GVFESAPSLD HVGPIARSVA DLAAAMTAIG EGESPRALVT DLAAVRIGVD RRALELTGPK SRGAIERAIG LFGELGVTAV EVTLPPVAEL LAATGRLQAW ETAAVHAAWY PAHRGDYGPG LAATIDRGRA MQAGDLDDFE AVRAAYRQQL DALFATVDLI ILPVLTIDTP TLDEWEGAMR QADPLGARFT KPFNVTGHPA LALPGGFDAD GLPLGFQLVA RPADEAFLLG AGVAFQKISD WHRGLPRALP
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