| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4393 |
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| Symbol | |
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| ID | 5200360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4845380 |
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| End bp | 4846732 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583945 |
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| Product | amidase |
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| Protein accession | YP_001264869 |
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| Protein GI | 148557287 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.281674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAAG CGTTCGATCT CGACGTCACC GAATTGGGCA GTCGCTATCG TGACCGGACG
TTGTCGCCGG TCGAGGTCGA ACAGGGGCTG TCGGCGCGGA TTGCCCGGCT CGATCCGGAG
CTGGGCGCCT TCACCGCGCT GGCGGGAGAG GAAGCACGGA CGGCGGCGCG GCAGGCGGAG
GCCGAGCTCG CGGCCGGGAT CGATCGCGGC CCGCTGCACG GCGTCCCGGT GACGGTCAAG
GACCTCTGCC TCACCCGCGA CATGCCGACC GCGGCGGGGC TGCGCGGCTT CGCGGAGCGG
CTGCCGCGGC GCGACGCGGC GGTGGTGGCG CGGCTGCGCG AAGCGGGGGC GGTGCTGGTC
GGCAAGACCT ATACGACGGC GGGCGCCTTC GTCGATCCGG CGGCGGACCG GCCCTTTCCG
CGCCATCCGG GACGCGCGGA TATCTTTCCC GGGATGTCGT CGACCGGCGC CGGCGTGGCG
GTGGCGGCGG GGCTCTGCTC GGTCGCGATC GGGACCGACA CCGGCGGGTC GATCCGGCTG
CCGTCGATGT GTTGCGGGGT GAGCGGGTTC AAGCCGGCCT ATCGGCGGGT CGACGCCGAA
GGCGTTTTCG AGTCCGCGCC GTCGCTCGAT CATGTCGGGC CGATCGCCCG CAGCGTCGCC
GATCTGGCGG CGGCGATGAC GGCGATCGGG GAGGGTGAGA GCCCGCGCGC CCTCGTCACC
GATCTCGCGG CTGTGCGGAT CGGCGTCGAT CGCCGCGCCC TGGAACTGAC CGGGCCGAAA
AGCCGGGGTG CGATCGAGCG GGCGATCGGG CTGTTCGGCG AGCTCGGCGT GACGGCAGTC
GAGGTGACGC TGCCGCCGGT CGCGGAGCTG CTGGCGGCGA CCGGCCGGTT GCAGGCGTGG
GAGACGGCGG CGGTCCATGC CGCCTGGTAT CCGGCCCATC GCGGGGACTA TGGGCCGGGC
CTCGCCGCGA CGATCGACCG GGGCCGGGCG ATGCAGGCCG GCGATCTCGA CGATTTCGAA
GCGGTTCGGG CCGCCTATCG CCAGCAGCTC GACGCGCTGT TCGCCACGGT CGACCTGATC
ATCCTGCCGG TGCTGACGAT CGACACGCCG ACGCTGGACG AATGGGAGGG GGCGATGCGG
CAGGCGGACC CGCTGGGCGC GCGCTTCACC AAGCCGTTCA ACGTGACCGG CCACCCCGCG
CTCGCGCTGC CCGGCGGCTT CGATGCGGAC GGCTTGCCGC TGGGCTTCCA GCTCGTCGCG
CGGCCGGCGG ACGAAGCCTT CCTGCTCGGC GCCGGAGTCG CCTTCCAGAA GATCAGCGAC
TGGCATCGGG GCCTGCCGCG CGCCCTGCCG TAG
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| Protein sequence | MDEAFDLDVT ELGSRYRDRT LSPVEVEQGL SARIARLDPE LGAFTALAGE EARTAARQAE
AELAAGIDRG PLHGVPVTVK DLCLTRDMPT AAGLRGFAER LPRRDAAVVA RLREAGAVLV
GKTYTTAGAF VDPAADRPFP RHPGRADIFP GMSSTGAGVA VAAGLCSVAI GTDTGGSIRL
PSMCCGVSGF KPAYRRVDAE GVFESAPSLD HVGPIARSVA DLAAAMTAIG EGESPRALVT
DLAAVRIGVD RRALELTGPK SRGAIERAIG LFGELGVTAV EVTLPPVAEL LAATGRLQAW
ETAAVHAAWY PAHRGDYGPG LAATIDRGRA MQAGDLDDFE AVRAAYRQQL DALFATVDLI
ILPVLTIDTP TLDEWEGAMR QADPLGARFT KPFNVTGHPA LALPGGFDAD GLPLGFQLVA
RPADEAFLLG AGVAFQKISD WHRGLPRALP
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