| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4380 |
|---|
| Symbol | purT |
|---|
| ID | 5199324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4833638 |
|---|
| End bp | 4834825 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640583932 |
|---|
| Product | phosphoribosylglycinamide formyltransferase 2 |
|---|
| Protein accession | YP_001264856 |
|---|
| Protein GI | 148557274 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) |
|---|
| TIGRFAM ID | [TIGR01142] phosphoribosylglycinamide formyltransferase 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.722448 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCCTG TCGCCAGGAT ATTGCTGCTC GGTTCGGGTG AGCTCGGCCG CGAGTTCGCC
ATCGCCGCCA AACGGCTGGG CGCCTATGTC ATCGCCTGCG ATTCCTATGA GAGGGCGCCG
GCGATGCAGG TCGCCGACGA CTATGAGGTC CTGTCGATGC TCGACGGCGA GGCGCTCGCG
GCGGTGATCG AGAAGCACCG GCCCGATCAT ATCGTCCCCG AGGTCGAAGC GATCCGCACC
GAGGTGCTCC AGGATTTCGA GGACAAGGGC TATTCGGTGG TGCCGTCGGC GCGCGCGACG
ATGCTGACGA TGAACCGCGA CCGCATCCGC GACGTCGCCG CGAACGAGCT GGGCCTCGCC
ACCTCGCGCT TCCTCTATGC CGAGACGCTC GACGAGATGC GCGCGGCGGT GAAGGCGGTC
GGCATACCCT GCGTGGTGAA GCCGGTGATG TCCTCGTCGG GCAAGGGGCA GAGCATCGTC
ACCGCCGAGG AGGCCGTCGA CGCCGCCTGG GACTATGCGG TCGAAGGGAT GCGGGGCGAC
CGGCAGCGGG TGATCGTCGA GGCGTTCATC GCCTTCGACT ATGAGATCAC GCTGCTGACG
ATCCGGACGC GGCAGGGCGT GCTGTTCTGC GAGCCGATCG GGCATCGCCA GGAACTGGGC
GACTATCGCG AGAGCTGGCA GCCGACGCCG ATGTCGAAGA CCGCGCTCGC CGCCGCGCAG
GACATGGCGC GCAAGGTGGT CGACGATCTC GGCGGCTATG GCCTGTTCGG GGTCGAGTTC
TTCGTCGCCG GCGAGCAGGT GATCTTCTCC GAGCTGTCGC CGCGACCGCA CGACACCGGC
ATGGTGACGC TGATCTCGCA GAACCTGACC GAGTTCGACC TGCACGCCCG CGCGGTCCTC
GGCCTGCCGA TTCCGCATAT CCACCTCAAC GGCGCGGCGG CCTCGGCGGT CCTGCTGGCC
GATCGCCATG CCGAGGATTT CCGGATCGAG GGGCTGACGG AGGCCCTCGC GCCGGCGGCC
GGCGTCGAGA CCGACGTGCG GCTGTTCAGC AAGCCCGTCA CCCGGCCGAA CCGCCGCATG
GGCGTGGCGC TGGCGCTGGC GCGCGACGGG ACGGCCGACG ACGCCCGCGC CGCGGCCTGC
GCCGCCGTGG CGAAGCTCAG GATCGTCTAT GCGGGAGAAG AACGGTGA
|
|---|
| Protein sequence | MRPVARILLL GSGELGREFA IAAKRLGAYV IACDSYERAP AMQVADDYEV LSMLDGEALA
AVIEKHRPDH IVPEVEAIRT EVLQDFEDKG YSVVPSARAT MLTMNRDRIR DVAANELGLA
TSRFLYAETL DEMRAAVKAV GIPCVVKPVM SSSGKGQSIV TAEEAVDAAW DYAVEGMRGD
RQRVIVEAFI AFDYEITLLT IRTRQGVLFC EPIGHRQELG DYRESWQPTP MSKTALAAAQ
DMARKVVDDL GGYGLFGVEF FVAGEQVIFS ELSPRPHDTG MVTLISQNLT EFDLHARAVL
GLPIPHIHLN GAAASAVLLA DRHAEDFRIE GLTEALAPAA GVETDVRLFS KPVTRPNRRM
GVALALARDG TADDARAAAC AAVAKLRIVY AGEER
|
|---|
| |