| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4379 |
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| Symbol | |
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| ID | 5199323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4832308 |
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| End bp | 4833567 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583931 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001264855 |
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| Protein GI | 148557273 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATC GCCACGGTAC AACTTCATTT TACGCCACAT TCCGGAAGGG CTATGACGTC
CTGGGGTTTT CGGGGGGAGT TTCCGGCTCG GTGTCGGTGG ATTTCTTCAT CTTCGCGGTG
CTGCTGCTCG TCAACGGCCT GCTCGCGGTG GCAATGCTGC TCGCGGCGCG GACATTGGGC
CAGCCGAAGA TGGCGATGCT GCTCGCCGGC GCCTTTGGCG GCAACGTGCT GCTCTATGCG
AGCGACGCCA CCTACTTCTT CCTCTTCAAG GGCAATAGCT GGGTCAACCT GGCGGTCAGC
TCGATCGCGA TGACCCCGCC CATCCTCGCC GCCATGGCCT ATCGGATGCG ATCGGGCCTC
CCTTCCCGCG TGGTCCCGCT GATCGCGACC CATGTCGCCG CGCTGTTGCT GATCCTCTGG
TACAGCATCG GCGATCCCGA TCGGGGGATG CGCAGCGCCA TCGTCCCGCT CTACGCTTCG
GCGGTGCTGC TGTTCGGCGT GACGACCGCG CTCGCGCATC CCGGCCGCAA GCTGCGGCTG
GGGGAACGGC CGATCATCTT CACCTGCTTC GGTCTCGCCG CGGTCGAGCT GGCCGGCGGC
ATCGTGCTGG CGGCGATGGG CAATGGCGAG TCGGCCGTCC TCGACCGCGC CTATACCTAC
ATCGTCTTCC TCGGCCTGCC GGCGATGACG GTCGGAGCCG GCATCTTCTC GCTCTACCTG
ATGGGCGGCG ACCTAGCCGA AAAGCTGCGC CTGACCGCCG AGACCGACTC GCTGACCGGC
GCGCCGAACC GGCGGGCGGT CGAAGCCGCG GGCAGCCGCA TGATGGAAGA GGCCCGCGCC
ACCGGCCGGC CACTGTCGAT CGCGATCTGC GACGTCGACC ATTTCAAGGA GATCAACGAC
CTCCACGGCC ATGGCCATGG CGACGAGGTG CTGTGTCGCC TCACCGACCT GTTCCGCGAC
CAGCTCGGCG CCGCCGACCA TTATGGCCGC TTCGGCGGCG AGGAATTCGT CCTGCTCTTT
CCCGGCAGCG ACGCCGAGAC GGCCCGCATC CTGGTCGAGG CGCTTCGCAC GCGGATCATG
GCGGTGCAGA TCGGCGACCT GCCGCTGCGG CTGACCGCCA GCTTCGGCGT CGCGGCGATG
GGCGCCGACG ACCATATCCT CGCCGACATC CTCAAGCGCG CCGACCGGGC GCTCTACGCG
TCGAAGGAGA ATGGGCGGAA CCGGACGACC GTCGATCGCC AGGCCCAGCC CGCCTTCTGA
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| Protein sequence | MAYRHGTTSF YATFRKGYDV LGFSGGVSGS VSVDFFIFAV LLLVNGLLAV AMLLAARTLG
QPKMAMLLAG AFGGNVLLYA SDATYFFLFK GNSWVNLAVS SIAMTPPILA AMAYRMRSGL
PSRVVPLIAT HVAALLLILW YSIGDPDRGM RSAIVPLYAS AVLLFGVTTA LAHPGRKLRL
GERPIIFTCF GLAAVELAGG IVLAAMGNGE SAVLDRAYTY IVFLGLPAMT VGAGIFSLYL
MGGDLAEKLR LTAETDSLTG APNRRAVEAA GSRMMEEARA TGRPLSIAIC DVDHFKEIND
LHGHGHGDEV LCRLTDLFRD QLGAADHYGR FGGEEFVLLF PGSDAETARI LVEALRTRIM
AVQIGDLPLR LTASFGVAAM GADDHILADI LKRADRALYA SKENGRNRTT VDRQAQPAF
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