Gene Swit_4363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4363 
Symbol 
ID5200079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4817658 
End bp4818821 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID640583917 
Productmethylamine dehydrogenase heavy subunit 
Protein accessionYP_001264841 
Protein GI148557259 
COG category 
COG ID 
TIGRFAM ID[TIGR02658] methylamine dehydrogenase heavy chain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.382707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTGA GAAGATTTCT CGGGGCGGCA GCCCTGGCGA TCGTGGCGGG GGCCGCCCAG 
GCGGCAAGCT ATCCGGAGCC GCTGGCGAAC GAGCCGATCC CCAATGTCGT CGAGCTGTCG
GCGCAATATC CGGCGAGCTG GATCTATGTG CAGGACCTGC ACTTCAACAG CCTGCCCGAC
GGCCGCGCCG CGATCGTCGA CGTCGCCGCC GACGCCCGCG CGTTCAAGGG GCAGGTGCCC
GTCGCGCAGT TCGGCACGCT GCTGCCGTCG ACGACCCGGC CGGATATCTA CGTCGCCGAG
ACCTTCTTCT CGCGGATGAC GCGGGGCGAG CGGACCGACG TGATCACGAT CTGGGACAAG
GCGACGCTCA AGACCAAGGG CGAGATCGTC CTGCCCGGCG GCAAGCGGGG CCAGTTCGTC
ACGCTGCGCA ACAGCTTCCA GCTCACCAAT GGCGAGAAAT GGGCGCTGCT GTTCAACTTC
ACGCCGGCCT CGTCGGTGTC GGTGATCGAC ATCGACGCGC GCAAGATCCT GAACGAGATC
GACCTGCCCG GCTGCTCGCT GGTCTATCCG ACCGGCCCGC GCGGCTTCAC CTCGCTCTGC
GCCGACGGGA CGATGACGAG CATCGAGCTC GACGATGCCG GCAAGGTCGC CGCGAGCAGC
ACCAGCAAGC CGATCAACGA CATCGACCAT GACCCGATGT TCATGACCCC GGCGATGGTC
GGCAAGACCG CCTGGTTCGT CACCTTCAAG GGCAATATCC ACGGGCTCGA CCTGGCCAAT
GCCAAGGCCC GCGACCTGGG CGTGTTCCCA ATGCCCAAGG AGAAGACGGC CGAGGGCGAA
TGGCGGCCGG GCGGCTGGCA GGTGATCAGC GCCGATGCGG CGGGCCGGCT CTACGTGCTG
ATGAACCCGG CCGGCAAGGA GGGCAGCCAC AAGGACGGCG GCAGCGAGGT GTGGGTCGTC
GATCCCGCCA GGAAGCAGCG CGTCGCCCGC ATCCCGCTCC AGAACCCGGC GGTGTCGGTC
GAGGTGACGG CGCAGAGCGC GCCGCTGCTG GTCGCATCGC GGAGCGACGG GTCGCTCGAC
GTCTATGACG CGGCGAGCGG CGCCTTCCAG CGGACGCTGG CGCAGGTCGT CCATGACCCG
ATGACGATGA CGGCGTCGCG GTGA
 
Protein sequence
MKVRRFLGAA ALAIVAGAAQ AASYPEPLAN EPIPNVVELS AQYPASWIYV QDLHFNSLPD 
GRAAIVDVAA DARAFKGQVP VAQFGTLLPS TTRPDIYVAE TFFSRMTRGE RTDVITIWDK
ATLKTKGEIV LPGGKRGQFV TLRNSFQLTN GEKWALLFNF TPASSVSVID IDARKILNEI
DLPGCSLVYP TGPRGFTSLC ADGTMTSIEL DDAGKVAASS TSKPINDIDH DPMFMTPAMV
GKTAWFVTFK GNIHGLDLAN AKARDLGVFP MPKEKTAEGE WRPGGWQVIS ADAAGRLYVL
MNPAGKEGSH KDGGSEVWVV DPARKQRVAR IPLQNPAVSV EVTAQSAPLL VASRSDGSLD
VYDAASGAFQ RTLAQVVHDP MTMTASR