Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4363 |
Symbol | |
ID | 5200079 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4817658 |
End bp | 4818821 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640583917 |
Product | methylamine dehydrogenase heavy subunit |
Protein accession | YP_001264841 |
Protein GI | 148557259 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02658] methylamine dehydrogenase heavy chain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.382707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTGA GAAGATTTCT CGGGGCGGCA GCCCTGGCGA TCGTGGCGGG GGCCGCCCAG GCGGCAAGCT ATCCGGAGCC GCTGGCGAAC GAGCCGATCC CCAATGTCGT CGAGCTGTCG GCGCAATATC CGGCGAGCTG GATCTATGTG CAGGACCTGC ACTTCAACAG CCTGCCCGAC GGCCGCGCCG CGATCGTCGA CGTCGCCGCC GACGCCCGCG CGTTCAAGGG GCAGGTGCCC GTCGCGCAGT TCGGCACGCT GCTGCCGTCG ACGACCCGGC CGGATATCTA CGTCGCCGAG ACCTTCTTCT CGCGGATGAC GCGGGGCGAG CGGACCGACG TGATCACGAT CTGGGACAAG GCGACGCTCA AGACCAAGGG CGAGATCGTC CTGCCCGGCG GCAAGCGGGG CCAGTTCGTC ACGCTGCGCA ACAGCTTCCA GCTCACCAAT GGCGAGAAAT GGGCGCTGCT GTTCAACTTC ACGCCGGCCT CGTCGGTGTC GGTGATCGAC ATCGACGCGC GCAAGATCCT GAACGAGATC GACCTGCCCG GCTGCTCGCT GGTCTATCCG ACCGGCCCGC GCGGCTTCAC CTCGCTCTGC GCCGACGGGA CGATGACGAG CATCGAGCTC GACGATGCCG GCAAGGTCGC CGCGAGCAGC ACCAGCAAGC CGATCAACGA CATCGACCAT GACCCGATGT TCATGACCCC GGCGATGGTC GGCAAGACCG CCTGGTTCGT CACCTTCAAG GGCAATATCC ACGGGCTCGA CCTGGCCAAT GCCAAGGCCC GCGACCTGGG CGTGTTCCCA ATGCCCAAGG AGAAGACGGC CGAGGGCGAA TGGCGGCCGG GCGGCTGGCA GGTGATCAGC GCCGATGCGG CGGGCCGGCT CTACGTGCTG ATGAACCCGG CCGGCAAGGA GGGCAGCCAC AAGGACGGCG GCAGCGAGGT GTGGGTCGTC GATCCCGCCA GGAAGCAGCG CGTCGCCCGC ATCCCGCTCC AGAACCCGGC GGTGTCGGTC GAGGTGACGG CGCAGAGCGC GCCGCTGCTG GTCGCATCGC GGAGCGACGG GTCGCTCGAC GTCTATGACG CGGCGAGCGG CGCCTTCCAG CGGACGCTGG CGCAGGTCGT CCATGACCCG ATGACGATGA CGGCGTCGCG GTGA
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Protein sequence | MKVRRFLGAA ALAIVAGAAQ AASYPEPLAN EPIPNVVELS AQYPASWIYV QDLHFNSLPD GRAAIVDVAA DARAFKGQVP VAQFGTLLPS TTRPDIYVAE TFFSRMTRGE RTDVITIWDK ATLKTKGEIV LPGGKRGQFV TLRNSFQLTN GEKWALLFNF TPASSVSVID IDARKILNEI DLPGCSLVYP TGPRGFTSLC ADGTMTSIEL DDAGKVAASS TSKPINDIDH DPMFMTPAMV GKTAWFVTFK GNIHGLDLAN AKARDLGVFP MPKEKTAEGE WRPGGWQVIS ADAAGRLYVL MNPAGKEGSH KDGGSEVWVV DPARKQRVAR IPLQNPAVSV EVTAQSAPLL VASRSDGSLD VYDAASGAFQ RTLAQVVHDP MTMTASR
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