| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4358 |
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| Symbol | |
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| ID | 5198660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4810920 |
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| End bp | 4813190 |
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| Gene Length | 2271 bp |
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| Protein Length | 756 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583912 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264836 |
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| Protein GI | 148557254 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGGCA CATCGCAGCT CCGGCTGGCC GCCAGCATCA GCATCGCCGC GCTCGCGCTG
GCCACCGCGT CGGCCGCCGC CGCCCAGCAG GCCGCCGACG ACGGCGCCGG CATCCAGGAG
ATCGTCGTCA CCGCGCAGAA GCGCCAGCAG TCGGGGCAGG ATGTCGGCAT CGCGTTGTCG
GTGGTCTCCG CCGACGCGCT CGCCCAGCGC AACGTCACTT CGGTCACCGA CCTGACCGGG
CTGGTGCCGA ACGTGCAGGC CAATTTCGGC GCGGGGCAGG TGGCGTTCAA CGTGCGCGGC
ATCGGCACCA ACGAGTTCTC CGCCAATTTC GACTCGCCGG TCGCGCTCAA CGTCGACGAG
GTCTATCTGT CGAAGAACTT CATGAGCGGC CTGCTGCTGT TCGACATCGA CCGGGTCGAG
GCGCTGAAGG GGCCGCAGGG CACGCTGTTC GGGCGCAACG CCACCGGCGG CACCGTCAAC
TTCTTCACGC GCGGGCCGAC CGACGACCTC GCGGCGGGCG GCACGATCAG TTACGACAAT
TATCAGACGA TCCGGGCCGA GGCCTATGTG TCGGGCCCGC TCGGCGCCGG CCTGTCGGCG
CGGCTGTCGG GCATGGTGGT CGACCAGAAC AAGGGCACCT ACCGCAACCT GACGCTCGGC
CGGCGCGAGG GCTTCGAGAA GAAATGGGCG CTGCGCGGCC AGCTCAAATG GACCGACGGC
GTCACCACCG CGCTGCTCTC GATCACCGGC GGACGCCAGC GCGGCGAGCT GTCGCCCTAT
GAGGGCGTCG GCGTCTTCAC CCCCGCCTCG GTCGCGGCGG GCGCGCCGGC GTTCTGCGCA
CCCTATCTGA ACGGCACGGT GCGCGGCGAT ACCGCCGGAT GCGTGCGCGG CACCGATGGC
GGCTATCCGG GCGATCGCGA TCCCTATACC TCGACCAACG ACCTGACCCA CAAAGTCCGC
AACGAGAGCC TGGGCGCGAC CCTGCGCATC GAGCACGACT TCGGCGCGAG CATGCTGACC
TCGCTCACCA GCTACCAGTT CGCGCGGCGC CGGCAGCTCG AGGATTCGGA CGGCAGCCCG
GTCCGCACGA TCGACGTGCA ATATGACAAC CGCATCCGCC AGATCAGCCA GGAGATCCGC
CTGTCGTCGA CCGGATCAGG GCCGTGGAGC TATGTCGTCG GCGGCTATTA CGAGCATGAC
GGCTATCGCA ACGGCGATTA CCTGTTCATT GGCGCGGGGG CGGCGCCCGG CTATTACAGC
CCCTTCACCC AGAAGGTCGA CGCGCTCGCC GCCTTCTTCC ACAACAATGT CGCGCTGACC
GACACGCTCG GGCTGGTCGC CGGAGTCCGC TACTCGCGCG AGCGGGTGTC GTTCGACGGC
GGCACCTTCG CCGCGACCGG GCTGGCCGGC ACGCCCTTCC GCCCGACCGC GCTGGTCGCG
CCGCTGTCGG CGGCCGACAC CAGCCGCAAG GACGACGACG CGACCTTCAA GGCAGGCGTC
GAATGGAAGC CCCGCCTGTC GTCGGAGCTG ATCGACAAGC TGCTGATCTA CGCGAACGTC
TCGACCGGCT TCCGGTCGGG ATCGTTCAAC GGCGAGTTCG CCGCGTCGCA GGCGGCGCTG
ACCTCGCTCG CCCCCGAGAA GATCACCGCC TATGAGGCGG GCTTCAAGTC GAGCCTGGCG
GACCGCACCG TCCAGTTCAA CGCCTCGGTC TTCCACTACA AGTTCACCGA CGGCTTCATC
AATGTCGACA GCGCGACCTC GCCGGTGCCG GTGACGATCA ACGCGGCCGG CATCTCCAGC
TATGGCATCG AGGCGGACCT GCTGTGGCGG CCGATCCGGC AGCTCACGCT GAGCATGGGT
GGCGGCTGGC TCGACTCGAA GATCGACAGC GACGTCACGG TCAACGGCCG GAGCCTGAAG
GACGCGCGCA CCATCCAGTC GCCACGCTGG ACCTACAATG TCCAGGGCAG CTTCACCCAG
CCGGTCGGCA ACGGCCTGTC GGTCGTGCTC TCGGGCGACG CCAATTACCG CTCGTCGCAA
TATTATGAGG TGACCAACTC GATCAACAGC CGCGAGCCGG GCTATTGGAT CGTCAACGGT
CGCATCGCCC TGAACGGGCC CGACGACCGC TGGTCGATCG CGCTGTTCGG CAAGAACCTG
ACCAGGACGG TCTATCGCAC CTATGTCAAC GACCTGCCCG ATTTCGGTTG GCTGCTGAAC
ATCTACGGCC AGCCGCGCAC CTATGGCCTG TCGGCCTCCT TCAAGCTGTG A
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| Protein sequence | MNGTSQLRLA ASISIAALAL ATASAAAAQQ AADDGAGIQE IVVTAQKRQQ SGQDVGIALS
VVSADALAQR NVTSVTDLTG LVPNVQANFG AGQVAFNVRG IGTNEFSANF DSPVALNVDE
VYLSKNFMSG LLLFDIDRVE ALKGPQGTLF GRNATGGTVN FFTRGPTDDL AAGGTISYDN
YQTIRAEAYV SGPLGAGLSA RLSGMVVDQN KGTYRNLTLG RREGFEKKWA LRGQLKWTDG
VTTALLSITG GRQRGELSPY EGVGVFTPAS VAAGAPAFCA PYLNGTVRGD TAGCVRGTDG
GYPGDRDPYT STNDLTHKVR NESLGATLRI EHDFGASMLT SLTSYQFARR RQLEDSDGSP
VRTIDVQYDN RIRQISQEIR LSSTGSGPWS YVVGGYYEHD GYRNGDYLFI GAGAAPGYYS
PFTQKVDALA AFFHNNVALT DTLGLVAGVR YSRERVSFDG GTFAATGLAG TPFRPTALVA
PLSAADTSRK DDDATFKAGV EWKPRLSSEL IDKLLIYANV STGFRSGSFN GEFAASQAAL
TSLAPEKITA YEAGFKSSLA DRTVQFNASV FHYKFTDGFI NVDSATSPVP VTINAAGISS
YGIEADLLWR PIRQLTLSMG GGWLDSKIDS DVTVNGRSLK DARTIQSPRW TYNVQGSFTQ
PVGNGLSVVL SGDANYRSSQ YYEVTNSINS REPGYWIVNG RIALNGPDDR WSIALFGKNL
TRTVYRTYVN DLPDFGWLLN IYGQPRTYGL SASFKL
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