| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4356 |
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| Symbol | |
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| ID | 5199953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4808574 |
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| End bp | 4809206 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583910 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001264834 |
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| Protein GI | 148557252 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.855391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGGCGG AGGCGGGCCG GCCGGTCGCG ATGCAGGCGC GCGGGCGCAA GCGGCGCGAG
GCGCTGCTCG CCGCCGCCCG CGAGCTGCTG GCGGAGCGCG AGAGCAGCCA GATCACGCTG
GCCGACATCG CCGCGCGGGC CGAGGTCTCG AAGAGCTCCG CCTATCATTT CTACACCGAC
GCGATCGAGC TGTTCGTCGA ACTGGTCTCG CTGCTCGACG GCGAGTTCCA GCAGGCGATC
GCGCGCCCGG TGGCGCAGGT CGCCGACTGG GAAGAGCTGA TGGGCATCGT GATCGATCGC
GCCGCCGGCT ATTTCGAGGA CAATCCGGCC GCGCAGCAAC TGATGCTCTC GTCGCAGACC
CCGCCCGCGA TCAAGCGCTA CAGCCGCCGC GCGGACGTCG ACACCAGCCG GCTGATCGAG
AGCCTGATCG ACGCGCATTT CGTGCTGCCC GACCTTCCCG ACCGCAGCCG CATCTTCTTC
TACGCGATCG AGGCGGCCGA CCTGATGTTC GGCCTGTCGC TGTTCGAGCG CGGCGCGTTG
CTGCGCGAGA TGGTCGACGA GGCGAAGCGG ATGAGCTGCG CCTATCTGGG GCTCTACATC
CCCCGTCACC TGCCGCGGCG GGAAAGCGCA TAG
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| Protein sequence | MTAEAGRPVA MQARGRKRRE ALLAAARELL AERESSQITL ADIAARAEVS KSSAYHFYTD
AIELFVELVS LLDGEFQQAI ARPVAQVADW EELMGIVIDR AAGYFEDNPA AQQLMLSSQT
PPAIKRYSRR ADVDTSRLIE SLIDAHFVLP DLPDRSRIFF YAIEAADLMF GLSLFERGAL
LREMVDEAKR MSCAYLGLYI PRHLPRRESA
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