| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4348 |
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| Symbol | |
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| ID | 5196843 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4796851 |
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| End bp | 4799118 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583902 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264826 |
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| Protein GI | 148557244 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.172153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TTCACAGGGT CATATTGTGC GCCGGCGCGG CGGGCTGGGC CTCGATCGCG
GCCACCCAGG GCGCCTTTGC CCAGGCCGCG CCGGTCGACG ACAGCGGCGA GATCGTCGTC
ACCGCGCAGA AGCGCGCCCA GTCGGTCCAG GACGTCGGCA TCTCGCTGAC CGCGATCGGC
GCCGACGAGC TGCGCCGCAA CCAGATGACC GACGTCAACC AGCTCGCCAA CCAGATCCCC
AACGTGCTCG CGACGACCAG CTCGAACCTG CCCGCCTTCA CGGTGCGCGG CATCGGCCTG
AACGAGTTCG CGTCGAACTT CGACTCGCCG GTCGCGGTCC ATATCGACGA GGTCTACAAG
TCGAAGCCCT ACATGCTGTC GATGCCCTTC TACGACATCC AGCGGGTCGA GGCGCTGAAG
GGGCCGCAGG GCACGCTGTT CGGCCGCAAC ACCACCGGCG GATCGGTCAA CTATTACACG
CAGGAGCCGC AGTTCACCCC GAGCGGCGGC TTCAACGCCA GCATCGACAA TTACGGCCGG
GTGCGCGCCG ACGGCTTCTT CAACCAGCCG CTCAGCGACA CCGTCGCCGC CCGCGCCTCC
TATTATGTCG CGCAAGGCTG GGGCGGCCCC TATCGCAACC TGCTGACCGG CAAGGACTTC
GGCAAGCCGA ACCAGCTCGC CGGCCGCCTC CAGCTCAAAT GGGCGGGCGA GGGCACGACC
GCGCGGCTGA TGGTCTACGG CTTCAAGGAC AAGAGCCAGC TCACCCCCTA TAAGAGCCCG
GGCCTGTTCA ACCCGGACGG CAGCTATTGC GCCGCCGTCT TCACTGGCGC GATCCAGAAG
GACCGGGGCG CCTGCCTGAA GTTCGGCTCG TTCGTGCCGG GGCCCGACCC GCGCGGCCTG
CGCGAGACGC AGAGCATCCG CAACATGAAC GCCGACGCGC CGTGGAAGGC CGACAATTCG
GCATTCGGCG GCTATCTGCG GCTGGAGCAG GAGGCGGGCG CCTTCCAGCT CACCTCGATC
ACCGCGTTCG ACTATTTCGA GCGCGACCAG GTCGATGACG GCGACAACAC GCCCTATGTC
GCGGTCAACC AGAACCTCTA CAGCCGGATC AAGCAGCTCT CGCAGGAGCT GCGCGCGACG
GCGAAGTTCG ACCGGCTCAA CGTCCTGATC GGCGGCTTCT TCGAGCATGA CTCGATCGAC
GAGGCGACCA ACGCCAATAC GAGCGAGAAT CCGTTGACCG GCCTGCCGCC CTTCGCGCCG
CGCCTCGCCG ACGACTACAA GCAGAAGGTC CGCTCGCTCG CGATCTTCAC CAACAACGAA
TATGCGGTGA CCGACCAGCT CTCGCTGATC GTCGGCCTGC GCTACACCAA CGACCGCACC
TCGCTCGACG GCAGCACCTA TCTGGGCGCG AACGACCCGA GCGGCCGCCG CCACCTGATC
ACCCCGGTGA TCCCGGTCGA CGCGCTCGTC GCGCACCGCA CCGACGGCAC CACCTCCTTC
CGGGGCGGCG TCAACTGGAA GGCGTCGCGC GACCAGCTCT TCTACGCCTC GATCTCGCGC
GGCTTCCGCA GCGGCGGCTA CAGTGTGCCG TTCGGCGGCG TGATCACGAC CTTCGACCCG
GAACGGCTGA CCGCCTATGA GATCGGGTCG AAGTCGCGGC TGCTCGATCG CACGCTCGAC
CTGAACCTCG CGGCCTTCTT CTACGATTAC AAGGACATCC AGACCAACGT CGACGATCCG
CTGTCGCCGC TGGTGCCGAT CACCCGCAAC ATCGGCGGCT CGCGCACCTA TGGCGCCGAG
GCGGAGCTGA CCTGGCGGCC CGATCCGAGC TGGACGGTGC GGCTGGGCGG CAGCTATCTC
GACGCCAGGT TCCGCAACAC CACGGCGGTC ATCACCACCT ATGCGGGGCC GGTGCCGCTC
GACGGCAAGC GTCCGGTCAA CACGCCGAAA TGGACCGCGC AGGGCCTGAT CCAGAAGAGC
GTGCCGCTGA GCGACGACCT CGACCTGATC GGCAGCACCG ACTTCAAATA TACCGCCAAG
CGCTATCTGG AGGCGACCAA CCAGCTGTTC GACCGGGCGC CCGCCTATTG GGTGCAGAAC
GCGCGGCTGG CCGTCGCCAG CAAGTCGGGT GGCTGGGAGA TCGCGGCCTG GGGCAAGAAC
ATCTTCAACA AGGATTACCT GACCTACCTG AACAACATCA GCTTCTTCCG CATCGAGATC
TATGGCGAGC CGGTTTCCTA CGGCCTTTCC GCCTCGATCA AGTTCTGA
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| Protein sequence | MKKLHRVILC AGAAGWASIA ATQGAFAQAA PVDDSGEIVV TAQKRAQSVQ DVGISLTAIG
ADELRRNQMT DVNQLANQIP NVLATTSSNL PAFTVRGIGL NEFASNFDSP VAVHIDEVYK
SKPYMLSMPF YDIQRVEALK GPQGTLFGRN TTGGSVNYYT QEPQFTPSGG FNASIDNYGR
VRADGFFNQP LSDTVAARAS YYVAQGWGGP YRNLLTGKDF GKPNQLAGRL QLKWAGEGTT
ARLMVYGFKD KSQLTPYKSP GLFNPDGSYC AAVFTGAIQK DRGACLKFGS FVPGPDPRGL
RETQSIRNMN ADAPWKADNS AFGGYLRLEQ EAGAFQLTSI TAFDYFERDQ VDDGDNTPYV
AVNQNLYSRI KQLSQELRAT AKFDRLNVLI GGFFEHDSID EATNANTSEN PLTGLPPFAP
RLADDYKQKV RSLAIFTNNE YAVTDQLSLI VGLRYTNDRT SLDGSTYLGA NDPSGRRHLI
TPVIPVDALV AHRTDGTTSF RGGVNWKASR DQLFYASISR GFRSGGYSVP FGGVITTFDP
ERLTAYEIGS KSRLLDRTLD LNLAAFFYDY KDIQTNVDDP LSPLVPITRN IGGSRTYGAE
AELTWRPDPS WTVRLGGSYL DARFRNTTAV ITTYAGPVPL DGKRPVNTPK WTAQGLIQKS
VPLSDDLDLI GSTDFKYTAK RYLEATNQLF DRAPAYWVQN ARLAVASKSG GWEIAAWGKN
IFNKDYLTYL NNISFFRIEI YGEPVSYGLS ASIKF
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