| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4345 |
|---|
| Symbol | |
|---|
| ID | 5198567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4793947 |
|---|
| End bp | 4794810 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640583899 |
|---|
| Product | thiosulfate reductase cytochrome B subunit (membrane anchoring protein)-like protein |
|---|
| Protein accession | YP_001264823 |
|---|
| Protein GI | 148557241 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4117] Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.159228 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.236917 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACGGG AAAATGAAGC TGGGCTGGCT GATCCCGCGA TCGGTCGGCA GCCGACGGTC
GTCGTCGTCC GGCATTCGCT GGTCGCGAGG CTATGGCATT GGACGACCGC CGGAACGGTC
GTCCTGCTGC TCTGGAGCGG CGTCATGATC TTCAACGTCC ACCCCCGCCT TTACTGGGGC
GATAGCGGCC ACAAGGGCGA AGCCGCGATC ATGGAGGTCG CGGCCCGCGA TCTTTCCCGC
ACCCCGCTCG AAGTAATCGG AAGGGCGGGA GGATATGAGG TCGATCTGAC CGGTTGGCTC
GGCTCGGTGT TGGACCTCGG CAGCGCCGGC AAATTTTTCG TCCTCATCGC CCCGTCCGCG
GATTTCCAGT TCGGCGCCAC GCGCGCGCTG CATTTCCTGG CGGCCGAGGT CCTGATCGCG
ACCTGGATTT TCTATGCCGT CTATCTCATG GCGAGCCGTC GTCTCGGACG ATGGGTGATA
TATCCGAAAG ACATGTCCCC ACGCATAATA TTCGGACAGA TAAAGTCCTA CTTTACCTTC
TGGAGGAAGG GCCGGGATGC GGAGATGGAC TATAATCCGA TCCAGAAGAT GATCTATATT
GCTTTATTTT TCATATTGAT ACCTGTTGCC ATTCTCTCGG GGATGACGAT GTCGAACGCC
ATGACGGCGC GCTTCCCCCT CCTCCTGGAT ATGTTCGGCG GCCGCCAGTC CGCCCGTACG
ATCCACTTCA TCGCGGCGGG ATCATTTGCG CTGTTCGTCG TGGTCCATAT CGCGGCGCTG
CTCATGGCGG GACCGGTCAA TCACATGCGC GCCATCGTCA CCGGCCGCTT CCGGATCACT
CAGAAGAAAG GCGTCGGGCG ATGA
|
|---|
| Protein sequence | MTRENEAGLA DPAIGRQPTV VVVRHSLVAR LWHWTTAGTV VLLLWSGVMI FNVHPRLYWG
DSGHKGEAAI MEVAARDLSR TPLEVIGRAG GYEVDLTGWL GSVLDLGSAG KFFVLIAPSA
DFQFGATRAL HFLAAEVLIA TWIFYAVYLM ASRRLGRWVI YPKDMSPRII FGQIKSYFTF
WRKGRDAEMD YNPIQKMIYI ALFFILIPVA ILSGMTMSNA MTARFPLLLD MFGGRQSART
IHFIAAGSFA LFVVVHIAAL LMAGPVNHMR AIVTGRFRIT QKKGVGR
|
|---|
| |