| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4344 |
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| Symbol | |
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| ID | 5198566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4792397 |
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| End bp | 4793827 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583898 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_001264822 |
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| Protein GI | 148557240 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.266344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.249969 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAAAAA GGACTGGACC ATCGACCGTG CGGCTCGACA TCCCGCTCGA CCGGTCCAGC
CCCTCGTTCC TCATGGAACA GATCAGCGCG ACGCTGCGGG ATGCCGTGCA ATCGGGCCAG
ATCGCCCCGG GGACCCGCCT GCCGTCATGG CGCGATCTGG CGACCCAGCT CGGGGTATCG
CGCGGAACCG TCCGTGCCGC TCTGGAACGA CTTGTCGATG ATCAGTTGAT CGTTTCGGCC
GGCCCGGCCG GCACCTTCGT GGCGAAAGCG CCGAGTCCCC AGACACCGGT CCCGGCCGCG
ACCGTCGCGC CGCCCATGCG GGATTATTTT CCGACATTTT CCGAAGCCGT CATGCCTTTC
CAGATCGGCG TGCCGGCGCA GGATGCCTTT CCGACGACGC TGTGGTCGCG GCTTGGCACG
CGCGGCGCCC GGCGCCATGC CACCGCCCCG ACGAGCTATC CCGATCCTCG CGGGGAACCG
GCGCTGCGGG AGGCCGTCGC GGCCTATCTG GCGGTCGCGC GCGGCATCCA CGCCCATGCC
GATCAGATCA TCGTCACCAA CGGCTATCGG ACCGGGCTGA GCCTCATCAT ACGCGGCCTC
GGCCTCGAAG GAACGGTCGC CTGGATGGAG GAGCCGGGCT TCCCCCTCGC CCGCATCGCA
CTCGGCCTCG CGAATATTCG CAATGTCCCG GTTCGCGTCG ATGCCGAAGG ACTGGATGTG
GACAGGGGCA TCGCGCTCGC TCCCGATGCC GCGCTCGCCA TCGTCACCCC CAGCCAGCAG
GCGCCGCTCG GCATGCCGCT TTCCGCCGAA CGCCGGGAGA AGCTCCTGGC CTGGGCGAAA
TCGGCTGATG CCTGGATCGT GGAGGACGAC TATCTCGGCG AGCTCCAGCT CGACGGCCGC
GCCTCCCCCG CGCTCGCGGC AGCGGACAGG AGCGGGCGGG TGATCCATAT CGGCACGTTC
AGCAAATCGA TCAGCCCGTC GCTTGCCCTC GGCTTCGTGG TGGTTCCCCC GGCGCTTGCC
GAGCACTTCG GAAATGTCGC CGCCTTCCAC TACCCCGCAC CCGGCATGTT GCTTCAGCAC
CTGGTCGCGA GCTTCATGAC GGAGGGCCAT TTCATGCGGC ATCTGAGAAA GATGAAACAG
CTCTATCGAT CGCGGCGGGA CATGCTCGTT GCCGCGATGG CCGATCTCCA TCCGGTATCC
GGGGGCTGTC TTTCGATCTT GCTCGATCTG GATCGAAACG CCGACGACGT CGAAATATGC
GGAAGCGCCT ATCGTCATCG GCTCGCCCCG GCCCCCTTAT CGGCATGGTA TGGGGATCGG
GCTGGCGCCC GTCGCGGCTT GCTGCTCTGC GTGACGAACT GCCTGCCCCA CATGCTGGAG
GACAATGTGG GGAAGCTGAG GCCGCTCGTC GCCGATCGAC GACCGATCTG A
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| Protein sequence | MAKRTGPSTV RLDIPLDRSS PSFLMEQISA TLRDAVQSGQ IAPGTRLPSW RDLATQLGVS
RGTVRAALER LVDDQLIVSA GPAGTFVAKA PSPQTPVPAA TVAPPMRDYF PTFSEAVMPF
QIGVPAQDAF PTTLWSRLGT RGARRHATAP TSYPDPRGEP ALREAVAAYL AVARGIHAHA
DQIIVTNGYR TGLSLIIRGL GLEGTVAWME EPGFPLARIA LGLANIRNVP VRVDAEGLDV
DRGIALAPDA ALAIVTPSQQ APLGMPLSAE RREKLLAWAK SADAWIVEDD YLGELQLDGR
ASPALAAADR SGRVIHIGTF SKSISPSLAL GFVVVPPALA EHFGNVAAFH YPAPGMLLQH
LVASFMTEGH FMRHLRKMKQ LYRSRRDMLV AAMADLHPVS GGCLSILLDL DRNADDVEIC
GSAYRHRLAP APLSAWYGDR AGARRGLLLC VTNCLPHMLE DNVGKLRPLV ADRRPI
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