| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4343 |
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| Symbol | |
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| ID | 5198565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4788747 |
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| End bp | 4792367 |
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| Gene Length | 3621 bp |
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| Protein Length | 1206 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583897 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001264821 |
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| Protein GI | 148557239 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit
[COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.808871 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0662323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGACG AAGCAACGGG GGCCGGCTGG CATTTCTGGA TCGATCGGGG CGGCACCTTC
ACCGATATCG TGGCGCTGTC GCCCGATCGC CGGACCGTGA CGCGCAAGCT GCTGTCGTCG
CACCCCGAGC GCTATGCCGA CGCGGCGATC CAGGGCATTC GCGACCTGCT CGGCCTCGCC
GCCGCCGATC CGATCCCGGC GGACCGGATC GCCAGCGTGA AGATGGGCAC CACCGTCGCC
ACCAACGCCC TGCTCGAACG GCAGGGCGAG GCGGTCGCGC TGGTCACCAC GCTCGGCTTC
CGCGACATGC TGCGCATCGG CTATCAGAAC CGGCCCCGGC TGTTCGACCG CCACATCGTC
CTGCCCGACC GGCTCGAACG GCGCGTGATC GAGGCGCGCG AGCGGATCGA TGCCGAGGGG
CGCGTGCTGC TGCCGCTCGA CGTCGACCAT GTCGAGGCGG AACTGCGCGG GGCCTTCGCG
GCGGGCTGCA CCGCCGTCGC GATCGTGCTG ATGCACGGCT ATCGCTTTCC CGCGCATGAG
GACCGGATCG CCGGGATCGC GCGCGGCATC GGCTTCACCC AGATATCGGT GAGCAGCCGG
GTCAGCCCGC TGATGAAGAT CGTCAGCCGC GGGGACACCA CGCTGGTCGA CGCCTATCTG
TCGCCGGTGC TCGGCCGCTA TGTGGCCCAG GTGGCGGAGG CGCTGGGCGA CGGCGTCCCG
CTCGCCTTCA TGCAGTCCAA TGGCGGGCTG ATCGGGGCGG AGCGCTTCCG AGGGCGCGAC
GCGATCCTGT CGGGGCCGGC GGGCGGCATC GTCGGCATGG TCCGCACCGC CGAGGCCGCA
GGCTTCGGCA AGGTGATCGG CTTCGACATG GGCGGCACCT CGACCGACGT GTCGCACTAT
GCCGGGAATT ACGAACGGAC GCTGGAGACC GTCGTCGCCG GCGTCCGGCT GCGCGTGCCG
ATGATGAGCA TCGACACGAT CGCGGCGGGC GGCGGATCGA TCTGCCGCTT CGACGGGACC
CGGCTGCGCG TCGGCCCCGA ATCCGCCGGG GCCGATCCGG GGCCGGCCTG CTATCGCCGG
GGCGGGCCGC TGACGATCAC CGACTGCAAC GTGCTGCTCG GCAAGCTCCA GCCCGACGTC
TTTCCGAAGC TGTTCGGGCC GGACGGGAAC CAGCCGATCG ACGCCGCGAT CGTCCGCCGG
ACGTTCGAGG CGCTGGCCGA CGAGGTCGCT GCCGCCGGCC TGCCGCCGAC CACGCCCGAG
GCGCTGGCCG AGGGATTCCT GGCGATCGCG GTCGAGGGCA TGGCCAATGC GATCAAGAAG
ATATCGGTCG CGCGCGGGCA TGACGTCGGC GACTATGTCC TCGCCTGTTT CGGCGGGGCG
GCGGGCCAGC ATGCCTGCCT CGTCGCCGAT GCGCTGGGCA TGGGCCATGT CATGATCCAC
CCGCTCGCCG GGGTGCTGTC GGCCTATGGC ATCGGCCTCG CCGACCAGCG CATCCTGCGC
CATCGCGCGG TCGAGGCGGC GCTGGGGGCA GCGGCGCTGG CGGAGGCCGC CGCGCTGATG
GACGCGCTGG AGGGCGAATG CCGCGCGCAG GTGGTGACCG ACGGCTTCGA TCCCGGCGGC
GCGCGCTTTC GCCGCAGCCT GCTGGTCCGC TACCAGGGGA CCGATACCGG CATCGAGATC
GACGAGGCCG ACGAGGCGAC GATCCGCCGC CTGTTCGAGG AACGCTATCG GCAGCGCTTC
AGCTTCGCGA TGCCGGACGT GCCGCTGATC GTCGAATCGG TCGCGGTCGA GCTGGTCGTG
CCCGCGATCC GGCCTGAAAC CGTCGCTGGC AGCGCCGCGC CGCCGCCCGA GGCGGAGCGG
CGGCAGGCTC GCCTGTTCGC GAACGGCGCC GGGCACCATG CGCCGGTGCT GGCGCGCGAG
ACGCTGGCGC CGGGCCGGTC GATCGCCGGG CCGGCGATCA TCCACGACAG CACCGCGACG
GTGGTGGTCG AGCCGGGCTG GTCGGCGCGG ACGACCGATG CGGGCGATCT GATCCTCAGC
CGCGTCGCGC CGCGCGAGCA GAGGGCAGGT GCCGACGGCA CGATGCTCGA TCCGGTCCGG
CTGGAGATCT TCAACAACCT GTTCATGGCG ATCGCCGAGC AGATGGGGCA GGCGCTTCAG
AACAGTGCCC TGTCGGTCAA CATCAAGGAA AGGCTCGACT TCTCCTGCGC GCTGTTCGAC
GGCGGCGGCG CGCTGGTCGC CAATGCGCCG CACATGCCGG TGCATCTCGG ATCGATGGGG
GACAGCGTGC GCGCGGTGCG CGACGCGGCG CGCGGTTCGT CGCGCGGGCT GCGCCCCGGC
GACGCCTATC TGATCAACAA TCCCTATAAT GGCGGCACCC ATCTGCCCGA CCTGACGGTC
GTGATGCCGG TGTTCGACGA TGACGGCCGC TGCTCCTTCT ACGTCGCCGC GCGGGGCCAT
CATGCCGACA TCGGCGGGCG CACGCCGGGA TCGATGCCGC CCGACAGCCG CACGCTCGAC
GAGGAGGGCG TGCTGTTCGA CGCCTTCCCG CTGGTCGAGG ACGGGCGCCT GCGCGAGGCC
GAGTTTCGCG CGAAGCTCGC CGCGGGGCCC TGGCCGGCGC GCGATCCCGA TCGCAACGTC
GGCGACATCC GCGCCCAGAT CGCCGCCTGC GCGCGCGGCG CCGACGAGAT CCGCAAGATG
GTCGCCCATT ATGGGCGCGA CACCGTCACC GCCTATATGC GCCATGTGCA GGACAATGCG
GCCGAGGCGG TGCGCCGCGT GCTCGACCGG ATCGGCGACG GCGCCTTCGC CTATGAACTG
GACGACGGAT CGCGCATCGC GGTGGCGATC CGGGTCGATC GCGCGGCGCG GCGGGCGGTG
ATCGACTTCA CCGGCACCAG CGCGCAGCAG GCGAGCAATT TCAACGCGCC GCCGTCGATC
TGCCGCGCAG CGGTGCTCTA TGTGATGCGC ACGCTGGTCG ACGAGGACAT ACCGATGAAC
GACGGCTGCC TCGAGCCGAT CGACATCGTC ATCCCCGAGG GATCGATGCT GCGCCCCGCC
TGGCCGGCGG CGGTGGTCGC GGGCAATGTC GAGACCAGCC AGGTGATCAC CGACGCGCTC
TACGGCGCGA CCGGCACGAT GGCGGCCGCG CAGGGGACGA TGAACAACTT CACCTTCGGC
GACGCGGTCT ACCAATATTA TGAGACGATC GGCGGCGGCA GCGGGGCGGG GCCGGATTTC
GACGGAACCG CGGCGGTGCA GACGCACATG ACCAACAGCC GGCTGACCGA TCCGGAAGTG
CTCGAATGGC GCTTCCCGGT GCTGCTGGAG GCGTTCGAGG TCCGCCGGGG ATCGGGCGGG
GCCGGCCGCC ATCGCGGCGG CGACGGCATC CACCGCCGCA TCCGCTTCCG CCAGCCGATG
ACGGCGACGA TCCTGTCCAA CCGCCGCCGC GTCGCGCCCT TCGGCCTCGA CGGCGGGGAA
GCCGGCGAGG CCGGACGCAA CCATGTGCGG CGGGCGGACG GCACGGTCGA GGCGGTCGGG
TCGACCGAGA GCGTCGAGAT GCGGGAGGGC GACGTGTTCG TGATCGACAC GCCGGGCGGC
GGGGGCTTCG GCCGGCCATG A
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| Protein sequence | MRDEATGAGW HFWIDRGGTF TDIVALSPDR RTVTRKLLSS HPERYADAAI QGIRDLLGLA
AADPIPADRI ASVKMGTTVA TNALLERQGE AVALVTTLGF RDMLRIGYQN RPRLFDRHIV
LPDRLERRVI EARERIDAEG RVLLPLDVDH VEAELRGAFA AGCTAVAIVL MHGYRFPAHE
DRIAGIARGI GFTQISVSSR VSPLMKIVSR GDTTLVDAYL SPVLGRYVAQ VAEALGDGVP
LAFMQSNGGL IGAERFRGRD AILSGPAGGI VGMVRTAEAA GFGKVIGFDM GGTSTDVSHY
AGNYERTLET VVAGVRLRVP MMSIDTIAAG GGSICRFDGT RLRVGPESAG ADPGPACYRR
GGPLTITDCN VLLGKLQPDV FPKLFGPDGN QPIDAAIVRR TFEALADEVA AAGLPPTTPE
ALAEGFLAIA VEGMANAIKK ISVARGHDVG DYVLACFGGA AGQHACLVAD ALGMGHVMIH
PLAGVLSAYG IGLADQRILR HRAVEAALGA AALAEAAALM DALEGECRAQ VVTDGFDPGG
ARFRRSLLVR YQGTDTGIEI DEADEATIRR LFEERYRQRF SFAMPDVPLI VESVAVELVV
PAIRPETVAG SAAPPPEAER RQARLFANGA GHHAPVLARE TLAPGRSIAG PAIIHDSTAT
VVVEPGWSAR TTDAGDLILS RVAPREQRAG ADGTMLDPVR LEIFNNLFMA IAEQMGQALQ
NSALSVNIKE RLDFSCALFD GGGALVANAP HMPVHLGSMG DSVRAVRDAA RGSSRGLRPG
DAYLINNPYN GGTHLPDLTV VMPVFDDDGR CSFYVAARGH HADIGGRTPG SMPPDSRTLD
EEGVLFDAFP LVEDGRLREA EFRAKLAAGP WPARDPDRNV GDIRAQIAAC ARGADEIRKM
VAHYGRDTVT AYMRHVQDNA AEAVRRVLDR IGDGAFAYEL DDGSRIAVAI RVDRAARRAV
IDFTGTSAQQ ASNFNAPPSI CRAAVLYVMR TLVDEDIPMN DGCLEPIDIV IPEGSMLRPA
WPAAVVAGNV ETSQVITDAL YGATGTMAAA QGTMNNFTFG DAVYQYYETI GGGSGAGPDF
DGTAAVQTHM TNSRLTDPEV LEWRFPVLLE AFEVRRGSGG AGRHRGGDGI HRRIRFRQPM
TATILSNRRR VAPFGLDGGE AGEAGRNHVR RADGTVEAVG STESVEMREG DVFVIDTPGG
GGFGRP
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