Gene Swit_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4340 
Symbol 
ID5198584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4785344 
End bp4785538 
Gene Length195 bp 
Protein Length64 aa 
Translation table11 
GC content70% 
IMG OID640583894 
Producthypothetical protein 
Protein accessionYP_001264818 
Protein GI148557236 
COG category[S] Function unknown 
COG ID[COG2879] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT GGCTCCGCCC CTTCCGCGCC ACGCGCCGGA TGATGCAGGC GATGGTCGGC 
CTGCCGAGCT ACGACGCCTA TCTGGCGCAC ATGGCCGCCG AGCACCCCGA CCGCGAGCCG
ATGGACTATC GCAGCTTCTT CCGCGACCGG CAGCAGGCGC GCTACGGCGG AAAGGGCGGC
GGCCGCTGCT GCTGA
 
Protein sequence
MSKWLRPFRA TRRMMQAMVG LPSYDAYLAH MAAEHPDREP MDYRSFFRDR QQARYGGKGG 
GRCC