| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4339 |
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| Symbol | |
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| ID | 5198583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4784558 |
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| End bp | 4785340 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583893 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_001264817 |
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| Protein GI | 148557235 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.221875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGACG AAGAGGCGGG CGCGGACAAG GATCCCGAAT TCATGACCTC GCTGGCGCGC
GGGCTGGCGG TGATTCGCTG CTTCGCCGAG CGGCGCGAGC CGCTGACCAT CGCCCAGGCA
GCGCAGGAGA CCGGCTTCAG CCGGCCGGCG GTGCGACGAT GCCTGCACAC CTTGGTCTGC
CTGGGCTATG CGGCGCGGAT CGGGCACCGC TATGCGCTCC AGCCCAAGGC GCTCGCGCTC
GGCTATGCCT ATCTGTCGTC GAGCCCGCTG GCGTCGCGGG CGCAGCCGAT GCTCGACGCG
CTGCGCGACG AGATCGGCGA ATCCTGCTCG CTCGGCGTGT GCGAGGAGGA GCAGGTCTAT
TATATCGCGC GGGCGGAAAG CTCGCGGATC ATGTCGATCG CGTTGCGGGC GGGCAGCCGG
CTTCCGCTCT ATCCGACGTC GATGGGCCGC ATCCTCCTCG CCGCCCGGAC CCGCAGCGAG
CAGCAGGCGT ATCTGCGCGG CACCTCGCTG GTCGCGTTGA CCGACAGGAC CGAAACCGAC
GTCGGCGCGC TGCTGGCGAT CCTCGCCGAG ACGGCCGAGC GCGGCCATGC GATCGTAGAC
CAGGAACTGG AGGTCGGGCT GCGCTCGGTC GCGGTGCCGG TCCACCAGGG CGGCAAGGTC
GTCGCCGCGC TCAACATCGG GACGCAGGCG AGCCGCGTGT CGATGGCCGA GCTGCGGTCG
CGCCTGCTGC CCGCGCTCCG GCGGGTCGCC ACCGACCTCA GCCGGGCGGG GTTGTTCGGA
TAG
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| Protein sequence | MADEEAGADK DPEFMTSLAR GLAVIRCFAE RREPLTIAQA AQETGFSRPA VRRCLHTLVC
LGYAARIGHR YALQPKALAL GYAYLSSSPL ASRAQPMLDA LRDEIGESCS LGVCEEEQVY
YIARAESSRI MSIALRAGSR LPLYPTSMGR ILLAARTRSE QQAYLRGTSL VALTDRTETD
VGALLAILAE TAERGHAIVD QELEVGLRSV AVPVHQGGKV VAALNIGTQA SRVSMAELRS
RLLPALRRVA TDLSRAGLFG
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