Gene Swit_4321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4321 
Symbol 
ID5199389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4765246 
End bp4766157 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content69% 
IMG OID640583875 
Productpirin domain-containing protein 
Protein accessionYP_001264799 
Protein GI148557217 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTCAA CAAGCGGCCT TCCCGGAAGG CACAGGAGAT ATGCGATGAA GACCATATTC 
GGCATCCACG GCAATTCCGC CCGGCATTGG GTCGGCGACG GTTTCCCGGT TCGCTCGCTC
TTTTCCTACA ACAGCCTCGG CGGGCAGGTG AGCCCGTTCC TGCTGCTCGA CTATGCCGGC
CCCCATGTCT TCGGGCCGAC GACCGGCCGG CGCGGCGTGG GGCAGCATCC CCATCGCGGG
TTCGAGACGG TCACGATCGT CTATGACGGC GAGGTCGAGC ACAAGGATTC GGCCGGCAAT
GGCGGCATCA TCGGCCCCGG TGACGTCCAG TGGATGACCG CGGCCGGCGG CATCCTGCAC
GAGGAATATC ATTCCGAGGC GTTCGCCAGG ACCGGCGGGC CGTTCCGCAT GGTCCAGCTC
TGGGTCAACC TGCCCGCGAA GGACAAGATG GCGCCCGGCG GCTATCAGGG CATCGTCGCG
GCCGACATCC CGACCGTCGA CCTGCCCGGC GGCGCCGGCA CCGGCCGGGT GATCGCGGGC
GAGCTACTCG GCGCGAAGGG GCCGGCGCGG ACCTTCACCC CGATCAACGT CTGGGACGTG
CGGCTGAACC GCGACGCCGA CCTGACCCTC GACCTGCCCG AAGGCCATGT CGCGCTGCTC
GTCGTGCTCG GTGGCCATGT CACGGTGAAC GGCGGGGCGG GCGCGGGCGA GGCGGAGGTG
GTGCAGCTCA GCCGCGAGGG CGGCGCGGTG CGCATCCAGG CCGATGGCGA CGCGGTGCTG
CTGGTCCTGA CCGGCGAGCC GATCGACGAG CCGATCGTCG GCTACGGCCC GTTCGTGATG
AACAGCGAGA CGGAGATCCG CCAGGCGATC GACGACTTCA ACAAGGGCAG GTTCGCGCAA
GCCGCGGCCT GA
 
Protein sequence
MVSTSGLPGR HRRYAMKTIF GIHGNSARHW VGDGFPVRSL FSYNSLGGQV SPFLLLDYAG 
PHVFGPTTGR RGVGQHPHRG FETVTIVYDG EVEHKDSAGN GGIIGPGDVQ WMTAAGGILH
EEYHSEAFAR TGGPFRMVQL WVNLPAKDKM APGGYQGIVA ADIPTVDLPG GAGTGRVIAG
ELLGAKGPAR TFTPINVWDV RLNRDADLTL DLPEGHVALL VVLGGHVTVN GGAGAGEAEV
VQLSREGGAV RIQADGDAVL LVLTGEPIDE PIVGYGPFVM NSETEIRQAI DDFNKGRFAQ
AAA