| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4317 |
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| Symbol | |
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| ID | 5199385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4758318 |
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| End bp | 4759484 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583871 |
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| Product | acetylornithine deacetylase (ArgE) |
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| Protein accession | YP_001264795 |
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| Protein GI | 148557213 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01892] acetylornithine deacetylase (ArgE) |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.663035 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGACT GGCTGCCGAT CCTGCGGACG CTGGTGGGCT TCCCCACGGT CAGCGCGGAC
AGCAACATGG AGCTGATCGA ATGGGTCCGC GACTATCTCG CCGGCCATGG CGTCGAAGCG
CACCTGACCT TCGACGCCGC CGGGCGGAAG GCCAATCTGT TCGCGACGGT GGTTCCGGGC
GACGGCGGCC TGATCCTGTC CGGCCACACC GACGTGGTGC CGGTGACGGG GCAGCAATGG
TCGAGCGATC CCTTCGCCGC CGAGCTGCGC GACGGCCGCG TCTATGGACG CGGAACCTGC
GACATGAAGG GGTTCATCGC GGTGGCGCTG GCGCTGGTGC CCGAGATGCG CGCGCTCGAC
GGCGCGCGTC CGCTGCACCT GGCGCTGTCC TATGACGAGG AGCTCGGCTG CCGGGGCGCG
CCGCGGATGA TCGACGACCT GGTGCGGCGC GGGGTGCGCG CGGGCGGCTG CATCGTCGGC
GAGCCGACCG GCATGAAGGC GATCATCGGC CACAAGGGCG CGGGCATGTA CCGCTGCACC
GTGACCGGGC GCGCGGCCCA TTCGTCGCTG GCGCCGACCG GCGTCAACGC GATCGAATAT
GCCGCCTGCA TCGTCATGAA GCTGCGCGAG ATCGGCCGCC GGCTCGAAGC GATCGAGCCG
CGCCATGCGG GCTTCGACGT GCCCTATTCG ACGATCCAGG TGAACCGCAT CGACGGCGGC
ACCGCCGGCA ACATCGTCGC CGACCGCTGC GAGCTGCGGA TCGACATCCG CCATCTGCCC
GCGACCGACC GTGCCGCGCT GATCGCCGAG GTCGCGGCCC ATGTGGCGGA CGAACTGCTG
CCCGAGATGC GGCTGCGCGC GCCGGAGGCG GCGATCAGCA TCGAGGAGGT CGCCGACATC
CCGCCGTTCG AGATCGCGGC GGACGCATCG CTGGTACGCG AGGTCGTTCG CTCGAACAGC
GTCGAGGGGG CGTGCGGCCA TGTCGCCTTC GGGTCGGAGG CAGGGCTGTT CCAGCGCGCG
GGCATCCCGA CGGTGATCTG CGGACCGGGT TCGATCGAGC AGGCCCATCG CCCCGACGAG
TTCGTCGCGA TCGAGCAGCT CGAGCGGTGC GATGGGATGC TCCGGACGAT GCTCGGCACG
GTCATGGCGG AGGTGGATAT TTATTAA
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| Protein sequence | MGDWLPILRT LVGFPTVSAD SNMELIEWVR DYLAGHGVEA HLTFDAAGRK ANLFATVVPG
DGGLILSGHT DVVPVTGQQW SSDPFAAELR DGRVYGRGTC DMKGFIAVAL ALVPEMRALD
GARPLHLALS YDEELGCRGA PRMIDDLVRR GVRAGGCIVG EPTGMKAIIG HKGAGMYRCT
VTGRAAHSSL APTGVNAIEY AACIVMKLRE IGRRLEAIEP RHAGFDVPYS TIQVNRIDGG
TAGNIVADRC ELRIDIRHLP ATDRAALIAE VAAHVADELL PEMRLRAPEA AISIEEVADI
PPFEIAADAS LVREVVRSNS VEGACGHVAF GSEAGLFQRA GIPTVICGPG SIEQAHRPDE
FVAIEQLERC DGMLRTMLGT VMAEVDIY
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