Gene Swit_4315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4315 
Symbol 
ID5197351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4757141 
End bp4757722 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content74% 
IMG OID640583869 
ProductMarR family transcriptional regulator 
Protein accessionYP_001264793 
Protein GI148557211 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGGACG ACGCCGGGCG GAGAAGGATC GGGAGCAGGC GGCCGGCCGC GAAGGGCGCC 
GCGCGCCGCG CCGGAGCCTC GGGCGAACCC GTGCCCGTCC TCGCCAAGAC CGGCGAGCTC
GCGGCGACGC TGCGGCGGCA GGTCGGCTTC CAGCTCGGCC GGGCGATGGG CGCGTCCTTC
CAGGCCTTCT CCGTGCTGGT CGACGACAAG GGGCTGCGCG CCGGCCATTA TGCGGTGCTG
CAGGTGATCT CCGACCATCC CGGCATCTCG CAGACCCAGC TCAGCCTCGC GGTCGGGCGC
GACAAGACGA CGCTGACGCC GCTGCTCAAG GAGATGGAGC GGGGCGGGCT GATCGCGCGC
CACGACCATC CGACCGATCG CCGCAGCCGG CTGCTCGACC TGACCGCGCT CGGCCGCAAG
AAGCTCTCGA TCCTCGCCGC CTGCGCCGCG CGGCATGAGC GGCAGCTCGA CGCGATCCTC
GGCGACGGGG AGCGGGCGGC GCTGCTCGCA CTGCTCAACA AGGTGGCGGA CGGCCTGACG
CTGGCCGGCG ACGACGGGGA CGAGGCTACG GACGAGGCGT GA
 
Protein sequence
MLDDAGRRRI GSRRPAAKGA ARRAGASGEP VPVLAKTGEL AATLRRQVGF QLGRAMGASF 
QAFSVLVDDK GLRAGHYAVL QVISDHPGIS QTQLSLAVGR DKTTLTPLLK EMERGGLIAR
HDHPTDRRSR LLDLTALGRK KLSILAACAA RHERQLDAIL GDGERAALLA LLNKVADGLT
LAGDDGDEAT DEA