| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4307 |
|---|
| Symbol | |
|---|
| ID | 5198248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 4751894 |
|---|
| End bp | 4752352 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640583861 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001264785 |
|---|
| Protein GI | 148557203 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02337] homoprotocatechuate degradation operon regulator, HpaR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAC CCCGTCGGAA ACTTCAGCCC TATCGCCAGT CGCTGGCGGG AACCCTTCTC
GCCGCGCGCG AGGCGGTCAT GGCGCCGCTG CGGCCGATGC TGCGCGACGC CGGCGTCACC
GAGCAGCAAT GGCGCGTGCT GCGCGTCATC CGTGATTCCC AACCGATCGA CGCGACCGCG
CTGGCCGACG CCGCTTTGCT GTTCGGCCCC AGCGTCACCC GCATCCTGAA GGAGCTGCTC
GACCGCCGCC TGATCGTCCG CGAGACCGAT CCGCGCGACC GACGACGCTC GATCGTCACC
CTCACCCCGG CGGGCCGCGC GCTGATCGAG CATACCGCCA GCCAGACCGT GCAGGTGCTC
GACCGCTATG CCGAGCGCTT CGGCCCCGAG CGGCTCGAAA CGCTCAAGAA CGAGCTGCGC
GCGCTGATCG ACGCGATCGG GCCGCTCGGC GAGGACTGA
|
|---|
| Protein sequence | MQEPRRKLQP YRQSLAGTLL AAREAVMAPL RPMLRDAGVT EQQWRVLRVI RDSQPIDATA
LADAALLFGP SVTRILKELL DRRLIVRETD PRDRRRSIVT LTPAGRALIE HTASQTVQVL
DRYAERFGPE RLETLKNELR ALIDAIGPLG ED
|
|---|
| |