| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4305 |
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| Symbol | |
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| ID | 5198973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4748948 |
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| End bp | 4750450 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583859 |
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| Product | 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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| Protein accession | YP_001264783 |
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| Protein GI | 148557201 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR02299] 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAGG ATCGCCGCAG CGGCGCCATC GACCGCATCA CCGCCATCGA CGACGGCTGC
ATCGGCCACT TCATCGCGGG GCAGGCAGTG CCCGGCGCCG GCACCACCTT CGACGTGACG
GAGCCCGCGA CGGGCCAGTC GCTCGGCACC GCGCGCGACG CGACCGCCGG GGAGCTCGAC
GCCGCCGTCA AGGCCGCCAA GGACGCTTTC CCCGCCTGGG CGGCGGTGCC GGGCGACAAG
CGCCGCGCCG TCCTCCACCG CATCGCCGAC CTGATCGTCG AGCGGGCCGA GGAGATCGCC
GCGGTCGAGT GCGTCGACGC CGGCCAGTGC TGGCGCTTCA TGTCGAAGGC GGCGATCCGC
GGCGCGGAGA ATTTCCGCTT CTTCGCCGAT CGCGCGCCGG GCGCCCGCGA CGGCCAGGCG
CTGCCGGCGG GCGGGCAGCT CAACGTCACC ACCCGCACCC CGATCGGCCC GGTCGGCGTG
ATCACGCCGT GGAACACGCC GTTCATGCTG TCGACCTGGA AGATTGCCCC CGCGCTGGCG
GCGGGCTGCA CGGTCGTCCA CAAGCCGGCC GAATGGTCGC CCTATTCGGC GCGCCTGCTG
GTCGAGATCG CGCATGAGGC GGGGCTGCCC GCCGGCGTGT TCAACGCGGT CAACGGCCTG
GGCGAGACGA CCGGCCGGCG GCTGACCGAG CATCCCGACA TCAAGGCGGT GGCCTTCGTC
GGGGAATCGC GCACCGGATC GGCGATCATG AAGCAGGGCG CCGACACGCT GAAGCGCGTC
CATTTCGAGC TGGGCGGCAA GAACCCGGTC ATCGTCTTCG ACGACGCCGA TCTCGATCGC
GCGCTCGATG CCGTGGTGTT CATGATCTAC TCGCTCAACG GGCAGCGCTG CACCTCCTCG
TCGCGGCTGC TGGTCCAGTC GTCGATCCGC GAAGCGTTCG AGGCGAAGCT CGCCGCGCGC
GTCGCCAACC TCAAGGTCGG CGATCCGCTC GACCCGGCGA CCGAGGTCGG TCCGCTGATC
CACCAGCGCC ATCTCGACAA GGTCGCCAGC TACATGGACA TCGCCCGCGC CGACGGCGCG
AAGATCGCGG TCGGCGGCGA GCGGATCGAG GGGGCCGGCT ATTTCTTCCA GCCGACCCTG
TTCACCGGCG CGGCCCAGTC GATGCGGATC GCGCAGGAGG AGATTTTCGG CCCGGTCCTG
ACCGTCATCC CGTTCGAGGA CGAGGCCGAC GCGATCGCCA AGGCGAACGA CGTCGAATAT
GGCCTGGCCG GCTATGTCTG GACCCGCGAC ATGGGCCGCG GCCTGCGCGT CTCGCAGGCG
CTGGAGGCCG GCATGGTCTG GGTCAACAGC GAGAATGTCC GCCACCTGCC GTCGCCGTTC
GGCGGCGTGA AGGCGAGCGG CATCGGCCGC GACGGCGGCG ACTGGAGCTT CGACTTCTAC
ATGGAGACGA AGAACATCGC GCTCGCCTAT CAGGACCATG CGATCCAGAA GCTGGGCGCC
TGA
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| Protein sequence | MTQDRRSGAI DRITAIDDGC IGHFIAGQAV PGAGTTFDVT EPATGQSLGT ARDATAGELD
AAVKAAKDAF PAWAAVPGDK RRAVLHRIAD LIVERAEEIA AVECVDAGQC WRFMSKAAIR
GAENFRFFAD RAPGARDGQA LPAGGQLNVT TRTPIGPVGV ITPWNTPFML STWKIAPALA
AGCTVVHKPA EWSPYSARLL VEIAHEAGLP AGVFNAVNGL GETTGRRLTE HPDIKAVAFV
GESRTGSAIM KQGADTLKRV HFELGGKNPV IVFDDADLDR ALDAVVFMIY SLNGQRCTSS
SRLLVQSSIR EAFEAKLAAR VANLKVGDPL DPATEVGPLI HQRHLDKVAS YMDIARADGA
KIAVGGERIE GAGYFFQPTL FTGAAQSMRI AQEEIFGPVL TVIPFEDEAD AIAKANDVEY
GLAGYVWTRD MGRGLRVSQA LEAGMVWVNS ENVRHLPSPF GGVKASGIGR DGGDWSFDFY
METKNIALAY QDHAIQKLGA
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