| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4294 |
|---|
| Symbol | |
|---|
| ID | 5197973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 4734201 |
|---|
| End bp | 4734959 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640583848 |
|---|
| Product | Asp/Glu racemase |
|---|
| Protein accession | YP_001264772 |
|---|
| Protein GI | 148557190 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4126] Hydantoin racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTGA AATTGAAGTT CATCCTGCCC GTCCCGCTGT CGTCGGACGC GGCGCAGCGC
TTCGCCGCGC AGATTCCCGA GACGGTGCGC AAGCCCGGCC TGACGATCGA TTTCGTCGGT
TGTCGGGCCG GCGGACCGCT GATGGACAGC GACCATGACG CGACGCTCGC CGCCGCCTTC
GTCCTCGCGG CGGGGGCGCG GGCCGAGGAG GAGGGCTATG CGGCGGTGTG CAGCTTCTCG
ATGAGCGACA GCGGCCTGGC GGCGCTCCGG TCGCGCCTGA CGATCCCGGT GGTCGGCGCG
GCGCAGGCGT CGTTCGCGCT CGCCCAGCAG CTCGGGCGGA AATTCTCCGT CGTCACCATG
TGGGCGCCCT GGGCGCGGCG CCTCGAGGAG AATGTCGCGC GCTACGGCCT GAACGGCCGC
CTTGCCTCGA TCCGCCATAT CGACATGTCG CCCGACACCC AGGCGCTGCT GTCGGGCAAG
GAGGAGGTCG TGTTCGGCCG CCTCAGGGAG CAGGCGCTCG CCGCGATCGA GCGGGACGGC
GCCGACGTCG TCATCCTCGG GTCGACCACC ATGTACCAGG TCCATGCCCG GCTCGCGGCG
GCGCTGCCCT GTCCGGTCGT CAATCCGGGC CTCGCCGCCT ACAAGGCCTG CGAGACCATG
CTCGACCTCG GGCTGAGCCA CAGCAAGATC GGCTATCCCG CGCCCGCGAC CTTCGCCGAC
GACATCTTCG ACCAGATAAC CCCCGTGGCG GGAGCCTGA
|
|---|
| Protein sequence | MTVKLKFILP VPLSSDAAQR FAAQIPETVR KPGLTIDFVG CRAGGPLMDS DHDATLAAAF
VLAAGARAEE EGYAAVCSFS MSDSGLAALR SRLTIPVVGA AQASFALAQQ LGRKFSVVTM
WAPWARRLEE NVARYGLNGR LASIRHIDMS PDTQALLSGK EEVVFGRLRE QALAAIERDG
ADVVILGSTT MYQVHARLAA ALPCPVVNPG LAAYKACETM LDLGLSHSKI GYPAPATFAD
DIFDQITPVA GA
|
|---|
| |