Gene Swit_4292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4292 
Symbol 
ID5197971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4732410 
End bp4733324 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content74% 
IMG OID640583846 
Product(acyl-carrier-protein) S-malonyltransferase-like protein 
Protein accessionYP_001264770 
Protein GI148557188 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGG CCGTTCTGTG CTCGGGGCAG GGGCGGCAGG AGCGAGGGCT GTTCGCGATG 
TTTGCCGGCG AGCCGGCGGC GCGGCCGGTG CTCGCGGCCA CCGCTGCCCG GCTCGGCTGG
GATTCGCTGT CCCACCTCGA TCGCCTGTCC GATGCCGAGC TGTTCGCGAA CCGGACCGGG
CAGTTGCTGT GCGTCGCCCG CGCGCTCGCG GCGGTGGCGG TGCTGGACGA GGTGTTGCCG
CCGGACGCGA TCGTCGCCGG ATACAGCGTC GGCGAGCTGG CGGCCTGGGG CGTCACGGGC
CTCTGGTCGC CGTCCGAGAC GCTCGACCTC GCCGACGGAC GCGCCCGGGC GATGGACGCC
GCCAGCGGGG CCGACGACGG CCTCGCTTAT GTGCGGGGGC TGCCGCTGGA CCAGGTCGAG
GCGCTCGCCG CCCGCTTCGG CTGCGAGATC GCGATCGTCA ACCCGGACCG CCTCACCATC
CTCGGCGGCG TCACCGCCGA TCTCACGGCC TTGTGCGAAG CGGCGCTGGC CGGCGGGGCG
TTGCGGGCCG CGCCGATGCC CGTCCATGTC GCGTCGCACA CCTCGCGGCT TGCCGCCGCC
GCCGATGATT TCCTCGATCG GGCCCGTGCG ATCCCGGTTC GTCGCCCGCG TCGCGCCCTG
ATGTCGGCGA CGGGACCGCG CCTCTACCGG GCGGTCGCGC CCGACGTGGC AAGCCTCGCC
GGGCAGATCG CGACGGCGAT TGACTGGAAC GCCGTGCTCG ACGCGCTGTA CGAGCGCGGC
GTGCGGAGGC TTATCGAGTT CGGACCCGGA CAAAGCCTCG CGACGATGGC GCGCGGCCAG
TCGCGCTTCG ACGCCCGTGC GCTCGACGAG TTCGACGGCC TGGCCGGTGT CGCGGCGTGG
ATAGGGAAGG TGTGA
 
Protein sequence
MSLAVLCSGQ GRQERGLFAM FAGEPAARPV LAATAARLGW DSLSHLDRLS DAELFANRTG 
QLLCVARALA AVAVLDEVLP PDAIVAGYSV GELAAWGVTG LWSPSETLDL ADGRARAMDA
ASGADDGLAY VRGLPLDQVE ALAARFGCEI AIVNPDRLTI LGGVTADLTA LCEAALAGGA
LRAAPMPVHV ASHTSRLAAA ADDFLDRARA IPVRRPRRAL MSATGPRLYR AVAPDVASLA
GQIATAIDWN AVLDALYERG VRRLIEFGPG QSLATMARGQ SRFDARALDE FDGLAGVAAW
IGKV