Gene Swit_4287 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4287 
Symbol 
ID5196608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4729027 
End bp4729344 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content71% 
IMG OID640583841 
Productmalonate decarboxylase subunit delta 
Protein accessionYP_001264765 
Protein GI148557183 
COG category 
COG ID 
TIGRFAM ID[TIGR03130] malonate decarboxylase acyl carrier protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.318757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGGC TTCACTATGA TCTCGCCGCG CCGCGCGCGG CATCGGGCAC GCGGCCGATG 
GCGCTGGTCG GCGTCGTCGC GTCGGGCAAT CTGGAGGTGC TGGCCGAACG GAAGGGATCG
GCGGATCGCT GCACCGTCGA GATCTTCACC CCGGTTCGCG GCTTCGACGC GCTGTGGAGC
GCCGTCATCG CCGACTTCGT CGAGCGGCGC GACGCGGGCG GGCTCCATCT GTCGATCAAC
GACGGCGGCG CCCGGCCCGA TACGGTGACG CTGCGGCTGG CGCAGGCGGT CCGCGTCATC
GAGGCGGAGG AGGCATGA
 
Protein sequence
MQRLHYDLAA PRAASGTRPM ALVGVVASGN LEVLAERKGS ADRCTVEIFT PVRGFDALWS 
AVIADFVERR DAGGLHLSIN DGGARPDTVT LRLAQAVRVI EAEEA