Gene Swit_4279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4279 
Symbol 
ID5197549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4720399 
End bp4721193 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content71% 
IMG OID640583833 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_001264757 
Protein GI148557175 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.803902 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG GCTTCATCGG CCTGGGCGTG CAGGGACTGC CGCTGGCGCT CAACCTTCTG 
GACGGCGGGC ACGAGCTGCA CGGTTTCGAC GTCCGGCCCG AGCCGCTCGA CGAGCTGCGC
GATCGGGGCG GCACGGTCGC GGCCTCCCCG GCCGAGCTGG GCGCGGCGTG CGAGGTCGTC
ATGATCTGCG TCGTCTCCGA CCAGCAGGTG CGCGACGTGC TCGCCGGCGA GGATGGCGTG
CTGGCATCGG CGCGGCCCGG CCTGATCGTC GTGCTCCACA GCTCGGTGAG CACCGATACG
ATCGCGGAGG CTGCCAAGGC GACGCGCGAC CGGGGCGTCG TACTGGTCGA CGCGCCGGTC
AGCGGCGGGG CGCAGGGCGC GCGGGCGCGC ACCATGTCGT TCATGGTGGG CGGCGAGGAG
GCGGCGCTCG ATCGCTGCCA GCCGCTGTTC GAGCTGTCCG GCCCCAATAT CCTGCGGACC
GGCCCGGCCG GGACGGCGAC CCTCGCCAAG CTCGCGCATC AGGTCGCGAT CATCGGCAAC
ATCATGGCGA TGGCCGAAGC GGTCCGGCTG GGAACCGCCG GCGGACTGAG CGCCGAGATG
GTGAAGCAGG CGGTCGCGGG CGGGCTGGCG CGGAGCTGGA TCGCCGAGAC CTGGGGGGAG
ATCAAAATGG CTCCCCATGC TCTCCCGCTC TACTCCAAGG ATCTGGAGAA CAGCCTGCGG
TTCGCGAAGC AGATCGGCAT TTCGTTGCCG GGCGCGGAGC TCATGAAGCT CGAGCTGCCC
AATATTGTGC CCTAG
 
Protein sequence
MRIGFIGLGV QGLPLALNLL DGGHELHGFD VRPEPLDELR DRGGTVAASP AELGAACEVV 
MICVVSDQQV RDVLAGEDGV LASARPGLIV VLHSSVSTDT IAEAAKATRD RGVVLVDAPV
SGGAQGARAR TMSFMVGGEE AALDRCQPLF ELSGPNILRT GPAGTATLAK LAHQVAIIGN
IMAMAEAVRL GTAGGLSAEM VKQAVAGGLA RSWIAETWGE IKMAPHALPL YSKDLENSLR
FAKQIGISLP GAELMKLELP NIVP