Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4279 |
Symbol | |
ID | 5197549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4720399 |
End bp | 4721193 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640583833 |
Product | 2-hydroxy-3-oxopropionate reductase |
Protein accession | YP_001264757 |
Protein GI | 148557175 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.803902 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGATCG GCTTCATCGG CCTGGGCGTG CAGGGACTGC CGCTGGCGCT CAACCTTCTG GACGGCGGGC ACGAGCTGCA CGGTTTCGAC GTCCGGCCCG AGCCGCTCGA CGAGCTGCGC GATCGGGGCG GCACGGTCGC GGCCTCCCCG GCCGAGCTGG GCGCGGCGTG CGAGGTCGTC ATGATCTGCG TCGTCTCCGA CCAGCAGGTG CGCGACGTGC TCGCCGGCGA GGATGGCGTG CTGGCATCGG CGCGGCCCGG CCTGATCGTC GTGCTCCACA GCTCGGTGAG CACCGATACG ATCGCGGAGG CTGCCAAGGC GACGCGCGAC CGGGGCGTCG TACTGGTCGA CGCGCCGGTC AGCGGCGGGG CGCAGGGCGC GCGGGCGCGC ACCATGTCGT TCATGGTGGG CGGCGAGGAG GCGGCGCTCG ATCGCTGCCA GCCGCTGTTC GAGCTGTCCG GCCCCAATAT CCTGCGGACC GGCCCGGCCG GGACGGCGAC CCTCGCCAAG CTCGCGCATC AGGTCGCGAT CATCGGCAAC ATCATGGCGA TGGCCGAAGC GGTCCGGCTG GGAACCGCCG GCGGACTGAG CGCCGAGATG GTGAAGCAGG CGGTCGCGGG CGGGCTGGCG CGGAGCTGGA TCGCCGAGAC CTGGGGGGAG ATCAAAATGG CTCCCCATGC TCTCCCGCTC TACTCCAAGG ATCTGGAGAA CAGCCTGCGG TTCGCGAAGC AGATCGGCAT TTCGTTGCCG GGCGCGGAGC TCATGAAGCT CGAGCTGCCC AATATTGTGC CCTAG
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Protein sequence | MRIGFIGLGV QGLPLALNLL DGGHELHGFD VRPEPLDELR DRGGTVAASP AELGAACEVV MICVVSDQQV RDVLAGEDGV LASARPGLIV VLHSSVSTDT IAEAAKATRD RGVVLVDAPV SGGAQGARAR TMSFMVGGEE AALDRCQPLF ELSGPNILRT GPAGTATLAK LAHQVAIIGN IMAMAEAVRL GTAGGLSAEM VKQAVAGGLA RSWIAETWGE IKMAPHALPL YSKDLENSLR FAKQIGISLP GAELMKLELP NIVP
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