Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4275 |
Symbol | |
ID | 5197613 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4715516 |
End bp | 4716199 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640583829 |
Product | isochorismatase hydrolase |
Protein accession | YP_001264753 |
Protein GI | 148557171 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.41702 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.364343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCGA TCGACATCGA TCAGGATATC CGGGCCCGGC TGATCGCGAT GCGGGGCAGC CATCGGGGCC TGCTGGACTC GATCGATCCG AAGCGGACCG CGCACCTGAT CATCGACATG CAGAACGGCT TCACCCTGCC GGGTGCGATC GTCGAGATTC CGGTGGCGCG CGAGATCATC CCCGCGATCA ACGCCATCTC GCGCGCGGTG CGCGCGGCGG GCGGGCTGAA CGTCTTCGTC CAGTTCCTTG CGACCGAGGA GAGCAGCAAG GGCTGGTCGA CCTGGTTCGA CCGGTTCATC CCGGCGGACC GGCGCGATGC GATGCTGGAG ACGTTCGGGC CCGACAGCCA CGGCTTCGCG CTCCACGCGG ATCTCGACGT CGCGCCGTCC GACATCAGGG TCGACAAGAC CCGCTTCGGC GCCTTCGTGC AGGGGACGAG CGAACTGCAC GATCGGCTCC GGGAGCGCGG GATCGATACG CTGATCATCA CCGGGACGGC GACCAACGTC TGTTGCGAGT CCACCGCGCG CGACGCGATG CAGCTCGACT ACAAGGTGAT CGTCGTCGCC GATGCGACCG CGGCGCTGAC CGATGCCGAG CACAACCACG CGCTCGACGG CCTCGCCTGC TATTTCTCGG ACATCGTTTC GACCGAGGAG GTGGTCGACA CGCTGTCGGC CTGA
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Protein sequence | MHAIDIDQDI RARLIAMRGS HRGLLDSIDP KRTAHLIIDM QNGFTLPGAI VEIPVAREII PAINAISRAV RAAGGLNVFV QFLATEESSK GWSTWFDRFI PADRRDAMLE TFGPDSHGFA LHADLDVAPS DIRVDKTRFG AFVQGTSELH DRLRERGIDT LIITGTATNV CCESTARDAM QLDYKVIVVA DATAALTDAE HNHALDGLAC YFSDIVSTEE VVDTLSA
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