| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4265 |
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| Symbol | |
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| ID | 5200400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4702919 |
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| End bp | 4703857 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640583819 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001264743 |
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| Protein GI | 148557161 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.503566 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGGCG ACGTCAAGAA CATCTACCGC TCGATGCTCG ACAATCTGAG CGCGCTGCGC
GCCTTCGTGG CGGTGGTGGA AGCGGGCAGC TTCTCCGAGG CCGGCTATCG GCTGAACGTC
ATGCCCTCGA CGATCAGCAA GCATGTCTCC TTCCTGGAGG AGAAGATCCA CGGGCAGCTC
ATCGTCCGCT CCACCAAGCA TCTCTCGGTC TCCGAGCTCG GACGCCGCTT CTACGACCGG
TGCCTGATCA TCCTGAAGGA GGTCGAGGAA ACCGAAGCGG AGATGCTCGA ATATCAGATG
GAGCCGCAGG GCAAGCTGCG CATCACCATG GGGCCGTCCT TCGCCGGCTA CCACCTGCCG
CGGCTGATCC CGAGCTTCCT GGAACGCTAT CCCAAGATCA GCCTCGACTT CCGGGTCACG
CCCGAACTGG TCGACCTGAT CGACCACAGC ATCGACGTCG CGGTCCGCAT CAGCAGCAAT
CTGGAGCCCG GGCTGATCGC GGTGAAGCTG GCGCCCAACA TCCGCAGCGT GTGCGTGTCG
CCGGCCTATG TCGAGAAGTT CGGCATGCCG GCCGAGCCCA GGGACCTCGA AAGCCACAAT
TGCCTACTGA CCAACGAGGC GTCCAGCACC GCGAAATGGC GGCTGCTGCA GGACGGTGTC
GAGAATGTCG TCCATGTGTC GGGCAACCTG GTGGTCAACC ATGGCGACAT CTACAAGCAG
GCGATCCTCG ACGGCGTCGG CATCGGCCAT CTGTCGCGCT ACCTGGTCTA TCAGGAGATC
AACGACGGCC GGCTGATCGA ACTGTTCCCC GATCGCGGCG TGATCAACAG CTTCATCTAC
GTCGTCTATC CGCAGCGCCG CAACCTGCCG CTCAAGACGC GGGTGTTCAT CGATCACCTG
CGCGACGCCT TTCGCGGCAC GCCCGAATGG ATGGCGTGA
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| Protein sequence | MKGDVKNIYR SMLDNLSALR AFVAVVEAGS FSEAGYRLNV MPSTISKHVS FLEEKIHGQL
IVRSTKHLSV SELGRRFYDR CLIILKEVEE TEAEMLEYQM EPQGKLRITM GPSFAGYHLP
RLIPSFLERY PKISLDFRVT PELVDLIDHS IDVAVRISSN LEPGLIAVKL APNIRSVCVS
PAYVEKFGMP AEPRDLESHN CLLTNEASST AKWRLLQDGV ENVVHVSGNL VVNHGDIYKQ
AILDGVGIGH LSRYLVYQEI NDGRLIELFP DRGVINSFIY VVYPQRRNLP LKTRVFIDHL
RDAFRGTPEW MA
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