Gene Swit_4259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4259 
Symbol 
ID5197164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4696875 
End bp4697660 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content70% 
IMG OID640583813 
Productacetoacetate decarboxylase 
Protein accessionYP_001264737 
Protein GI148557155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG CGACGCATTT CCTGACGCCG ACGGGGCAGG CCAGCCTGGT CGACGACGCC 
CTCTACGGCT GGGGCGCCGA CATGCTGACC GTCTATCTGC GCTGCGATCC CGCGCGGTTG
CAGGCGCTGC TGCCCGCCGG GCTCAAGGTC GCGGACGGGT TGTGCATGGC CTATGTCGGC
GCCTTCCAGT CGACCAGCGA GGACCAGCCG GCGGCGATGC TGCGCAATCC GGCGGGCGCG
GTCTACAACG AAGCGGCGCT CAGCATCGCC TGCACCCATG GCGACCGGCA GGGCTATTTC
CCGGCCTTCG TCTGGGTCGA CAAGGAATGG TCGCTGATCC GCGGCTGGCT CAACGGCTAT
CCCAAGAAGA TCGGCGCGAT CACGCTGGCG CGGCCGCATC CCTACAACCC GGTGACGGGC
GGCCTGCGCG AAGGCGCGGT GGTCGGCGGG ATATGCGCGC GGCACGGCTT CACCCTGTTC
CGGCTGGGGC TGACGGTGAC GCGGGCCGGC GATGCCGGCG ACCTCCGGTC GCGCCCCGCC
ACCTTCGGCC ACCGCCACTG GCCGGCGCTG CACCCGACCC AGACGCCGGT GTCCGAACTG
GTCGAGGTCA ACCGCAGCGA CCTGAGGGTC GGCGATATCT GGGCCGGGGA GCCCTTCATC
GAGCTCGGCA GCGCGCCCGA CGAGGCGCTC GAATGTTTCG CCGATCATGA GGTGCTGGCG
GGCGTCACCT ATTCCTACGG CTTCCGCATC GGCGGGGCTA CTCGGCTAGA GTCTCTACGG
ATGTGA
 
Protein sequence
MAGATHFLTP TGQASLVDDA LYGWGADMLT VYLRCDPARL QALLPAGLKV ADGLCMAYVG 
AFQSTSEDQP AAMLRNPAGA VYNEAALSIA CTHGDRQGYF PAFVWVDKEW SLIRGWLNGY
PKKIGAITLA RPHPYNPVTG GLREGAVVGG ICARHGFTLF RLGLTVTRAG DAGDLRSRPA
TFGHRHWPAL HPTQTPVSEL VEVNRSDLRV GDIWAGEPFI ELGSAPDEAL ECFADHEVLA
GVTYSYGFRI GGATRLESLR M