Gene Swit_4255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4255 
Symbol 
ID5199300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4689313 
End bp4691205 
Gene Length1893 bp 
Protein Length630 aa 
Translation table11 
GC content70% 
IMG OID640583809 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_001264733 
Protein GI148557151 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA CCGCGAACAA TTCTCCAGCC AGCAGGCGCG GGCGCCCATC CATCGTGGGC 
GTCGCGGTCG CCGCGCTGTT CCCATGCCTC GGTCCCGCTG CCGTTTCCGC ACCGGCGCTG
AACCCGATGC TGTTGCCCGC TCAATATGAG GCGGCACCAT GGGTGTCGGT CCATCGGGAC
TCGTCGAATT CGGATCGTGC CCCCTTCGCG ACGACCGGCA AGGTGACGGT GTTGTGGTCG
GCGCTCGATG GCGCCGCCCT GATCAATCCC GGTTCGATCA ATGACCGGGG CGTGCTGTTC
GTCACCTCCG CGCGGGGGCG GACGTTCAGC AACCTCCATG CGATCGGCCC TGATGGCAAG
ATATTGTGGG AAGCGCCGCC GCAGCGCGAT CGCGACGGGC TCGACGCCTT CGCGGGCTTC
AACGCGCCCG TGCTCGATCA CGACGGCGAC GTCTATATCG GCGATTCCAA CCAGCTATGG
GCCTTCCACC CGGACGGCAG GCGGAAATGG GTGGCGCGGC TGCCTGAGGG ATCCGGCTCG
TTCGTCTATC AGGTCATTTC CCGGCAGGGC TATGTCGGCG GCATCACCAC CGAGGGCTGG
GTGCTGTTCT TCGATCGGAC CAGCGGTTCG CCGGCGGTCA AGCCGTTCCG CCTGCCGCAG
GGCGAGGCGC CGGCGACGGG CCCGCACCTG CCGGGGCTCT GGCAGGGCGG GCTGGTCGAC
CACGACGCCG GCAAGCTGTT CGAGAAGATC GCCTTCGGCT TCGGCGTCCA GGTGGCGAAC
GCGCCCGCGG TGCATCCTAC GACCGGGCGG ATCTTCATCA CCGCGGCCGG GCCGAAGGAG
GGTGATCGCT ATTCGGGCCG GCTCTACGGG CTCGACATCG TCGACGGCGA GGTGAAGATC
GGCTTCTCGA CCCGGATGGA CGGCGGCAGC GGGACGAGCC CGTCGATCTC GCCCGACGGC
CGATATGTAT ATTGCGCCGG CGAGGACGGC GTGATCCTGG CGATCGACGC GGACAGCGGC
GCGGTCCGCT GGTCGGCACA GGGGGAAGGG CTGCTCTCCC CCTCGCTCGC CGCCGACGGC
ACCATCCTGA CCGGCAACAT CTTCGGCGAT CCTACCGTCA TCGCCCTGAA CCCCAGGGAC
GGCTCGCAGC TCTGGGCGCG CGACTATTCG GACTATGCCC GGACGCGGCT CCCGGAGCTC
GCTCCCGAGC CGTCGCTGGC CGCGAGCGGC AAGCCGGTGA TGCGGCTGAT GAGCGTGATC
TCGCTGTCGT CGAACCTCGT CTGGGCCGGC TTTTCGCTGG GCTATGAGTT CCGGCCCGCC
GGTTCGGCGA AGCCGCTGAT ATCGCCCCAC AAATCGGTGG TGTGCGCGCT GAGCATCGCG
ACCGGCGAAT TGCAGCATTG CACCGATGTG CGCGACACGC TCGAAGGCAT CATCAGCATC
GGCGCGGGCG GGCGGCTCTA CGCCAGCCAC ACCTCGATCT TCAGCTCGAC CGCCTATTTC
GGCTATCGCG CCCTGCTCCC CGCGCGCTTT CGCGTGCCGA ACCGCCCGGT GGGCGGGCTG
ACGGCACTGG GCCCGGTCGC GCCGTGCGAC CAACTCGGCA TCGAGGCCGA CGCGATCCGG
CGCGGCCATG CGCGCGCGAT CGATGCCCTG AAGGCGGGCG ACGATCGCGG CGCCCGGGTC
GCGATCGATC AGGTCCGCGC GCAGTTGCTG ATCGCGCGCC AGTCGGTGGA GCGGCTGCGG
CTGCCGGGTG CGGCGGACGG CGCCTACACG GCAGCGCTCG ACACATCGCT CGCCGCGCTG
GGCGACGGCG GCCCGCTCTC CGTCGAGGCC ATTCGGTCGC TCGACGCCGA TCTTCCCGAT
CCGTCGTGCC GCCCCGCGGC GAAGCGGCCC TGA
 
Protein sequence
MIETANNSPA SRRGRPSIVG VAVAALFPCL GPAAVSAPAL NPMLLPAQYE AAPWVSVHRD 
SSNSDRAPFA TTGKVTVLWS ALDGAALINP GSINDRGVLF VTSARGRTFS NLHAIGPDGK
ILWEAPPQRD RDGLDAFAGF NAPVLDHDGD VYIGDSNQLW AFHPDGRRKW VARLPEGSGS
FVYQVISRQG YVGGITTEGW VLFFDRTSGS PAVKPFRLPQ GEAPATGPHL PGLWQGGLVD
HDAGKLFEKI AFGFGVQVAN APAVHPTTGR IFITAAGPKE GDRYSGRLYG LDIVDGEVKI
GFSTRMDGGS GTSPSISPDG RYVYCAGEDG VILAIDADSG AVRWSAQGEG LLSPSLAADG
TILTGNIFGD PTVIALNPRD GSQLWARDYS DYARTRLPEL APEPSLAASG KPVMRLMSVI
SLSSNLVWAG FSLGYEFRPA GSAKPLISPH KSVVCALSIA TGELQHCTDV RDTLEGIISI
GAGGRLYASH TSIFSSTAYF GYRALLPARF RVPNRPVGGL TALGPVAPCD QLGIEADAIR
RGHARAIDAL KAGDDRGARV AIDQVRAQLL IARQSVERLR LPGAADGAYT AALDTSLAAL
GDGGPLSVEA IRSLDADLPD PSCRPAAKRP