Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4255 |
Symbol | |
ID | 5199300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4689313 |
End bp | 4691205 |
Gene Length | 1893 bp |
Protein Length | 630 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640583809 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001264733 |
Protein GI | 148557151 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAA CCGCGAACAA TTCTCCAGCC AGCAGGCGCG GGCGCCCATC CATCGTGGGC GTCGCGGTCG CCGCGCTGTT CCCATGCCTC GGTCCCGCTG CCGTTTCCGC ACCGGCGCTG AACCCGATGC TGTTGCCCGC TCAATATGAG GCGGCACCAT GGGTGTCGGT CCATCGGGAC TCGTCGAATT CGGATCGTGC CCCCTTCGCG ACGACCGGCA AGGTGACGGT GTTGTGGTCG GCGCTCGATG GCGCCGCCCT GATCAATCCC GGTTCGATCA ATGACCGGGG CGTGCTGTTC GTCACCTCCG CGCGGGGGCG GACGTTCAGC AACCTCCATG CGATCGGCCC TGATGGCAAG ATATTGTGGG AAGCGCCGCC GCAGCGCGAT CGCGACGGGC TCGACGCCTT CGCGGGCTTC AACGCGCCCG TGCTCGATCA CGACGGCGAC GTCTATATCG GCGATTCCAA CCAGCTATGG GCCTTCCACC CGGACGGCAG GCGGAAATGG GTGGCGCGGC TGCCTGAGGG ATCCGGCTCG TTCGTCTATC AGGTCATTTC CCGGCAGGGC TATGTCGGCG GCATCACCAC CGAGGGCTGG GTGCTGTTCT TCGATCGGAC CAGCGGTTCG CCGGCGGTCA AGCCGTTCCG CCTGCCGCAG GGCGAGGCGC CGGCGACGGG CCCGCACCTG CCGGGGCTCT GGCAGGGCGG GCTGGTCGAC CACGACGCCG GCAAGCTGTT CGAGAAGATC GCCTTCGGCT TCGGCGTCCA GGTGGCGAAC GCGCCCGCGG TGCATCCTAC GACCGGGCGG ATCTTCATCA CCGCGGCCGG GCCGAAGGAG GGTGATCGCT ATTCGGGCCG GCTCTACGGG CTCGACATCG TCGACGGCGA GGTGAAGATC GGCTTCTCGA CCCGGATGGA CGGCGGCAGC GGGACGAGCC CGTCGATCTC GCCCGACGGC CGATATGTAT ATTGCGCCGG CGAGGACGGC GTGATCCTGG CGATCGACGC GGACAGCGGC GCGGTCCGCT GGTCGGCACA GGGGGAAGGG CTGCTCTCCC CCTCGCTCGC CGCCGACGGC ACCATCCTGA CCGGCAACAT CTTCGGCGAT CCTACCGTCA TCGCCCTGAA CCCCAGGGAC GGCTCGCAGC TCTGGGCGCG CGACTATTCG GACTATGCCC GGACGCGGCT CCCGGAGCTC GCTCCCGAGC CGTCGCTGGC CGCGAGCGGC AAGCCGGTGA TGCGGCTGAT GAGCGTGATC TCGCTGTCGT CGAACCTCGT CTGGGCCGGC TTTTCGCTGG GCTATGAGTT CCGGCCCGCC GGTTCGGCGA AGCCGCTGAT ATCGCCCCAC AAATCGGTGG TGTGCGCGCT GAGCATCGCG ACCGGCGAAT TGCAGCATTG CACCGATGTG CGCGACACGC TCGAAGGCAT CATCAGCATC GGCGCGGGCG GGCGGCTCTA CGCCAGCCAC ACCTCGATCT TCAGCTCGAC CGCCTATTTC GGCTATCGCG CCCTGCTCCC CGCGCGCTTT CGCGTGCCGA ACCGCCCGGT GGGCGGGCTG ACGGCACTGG GCCCGGTCGC GCCGTGCGAC CAACTCGGCA TCGAGGCCGA CGCGATCCGG CGCGGCCATG CGCGCGCGAT CGATGCCCTG AAGGCGGGCG ACGATCGCGG CGCCCGGGTC GCGATCGATC AGGTCCGCGC GCAGTTGCTG ATCGCGCGCC AGTCGGTGGA GCGGCTGCGG CTGCCGGGTG CGGCGGACGG CGCCTACACG GCAGCGCTCG ACACATCGCT CGCCGCGCTG GGCGACGGCG GCCCGCTCTC CGTCGAGGCC ATTCGGTCGC TCGACGCCGA TCTTCCCGAT CCGTCGTGCC GCCCCGCGGC GAAGCGGCCC TGA
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Protein sequence | MIETANNSPA SRRGRPSIVG VAVAALFPCL GPAAVSAPAL NPMLLPAQYE AAPWVSVHRD SSNSDRAPFA TTGKVTVLWS ALDGAALINP GSINDRGVLF VTSARGRTFS NLHAIGPDGK ILWEAPPQRD RDGLDAFAGF NAPVLDHDGD VYIGDSNQLW AFHPDGRRKW VARLPEGSGS FVYQVISRQG YVGGITTEGW VLFFDRTSGS PAVKPFRLPQ GEAPATGPHL PGLWQGGLVD HDAGKLFEKI AFGFGVQVAN APAVHPTTGR IFITAAGPKE GDRYSGRLYG LDIVDGEVKI GFSTRMDGGS GTSPSISPDG RYVYCAGEDG VILAIDADSG AVRWSAQGEG LLSPSLAADG TILTGNIFGD PTVIALNPRD GSQLWARDYS DYARTRLPEL APEPSLAASG KPVMRLMSVI SLSSNLVWAG FSLGYEFRPA GSAKPLISPH KSVVCALSIA TGELQHCTDV RDTLEGIISI GAGGRLYASH TSIFSSTAYF GYRALLPARF RVPNRPVGGL TALGPVAPCD QLGIEADAIR RGHARAIDAL KAGDDRGARV AIDQVRAQLL IARQSVERLR LPGAADGAYT AALDTSLAAL GDGGPLSVEA IRSLDADLPD PSCRPAAKRP
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