| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4251 |
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| Symbol | |
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| ID | 5197206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4683407 |
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| End bp | 4684453 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583805 |
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| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
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| Protein accession | YP_001264729 |
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| Protein GI | 148557147 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.731612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCGC TGCACCATGT CGACGACTTC GAACGCGTCG CCATCGACCG GATGACCCCC
GAGGCCCGCG ACCTCGCCAA TCTCGGCGCG GGCGAGGGCA AAGCGGTGGC GCGCAACCGT
GCCGCCTGGG GGCGATGGGC GCTGCGGCAG CGGGTGCTGC GCGACGTCGG CACATGCGAC
ACCGCCGTCG ACCTGTTCGG CGTGCCGGTG TCGATGCCGC TGCTGATCGC CCCGTCGGGC
CTGCACGGCC TGGTCCACCC CGACGCGGAA AGCGCGACGG CGCGGGCGGC GCAAGCGGCC
GACACGCTGA TGGTGCTGAG CATGAACAGC ACGCTTCCGG TCGAGGAGGT GGCGCCGCAC
TGCGACAAAT TCTGGTTCCA GCTCTACTGG GGCGCCGATC GCGGATTCCT CCGCGAGCTG
ATGGCGCGCG CCGCCGGGGC GGGGGCCAAG GCCTTCTGCC TGACGCTCGA CATGCCCGTC
CGGCCCTGGC TGCTGGGGCC GATGCGGCGC GCACTGGCGG CGGTCGGCGA CGTCCGGCCC
GCCCACGGCT TTCCGCGCAG CGGGCACCTC CAGGACGACG CGCGCTGGGA CCATGACGCG
CGGCTGACCT GGGCCGACCT GTCATGGCTG CGCGCCAACA GTCCGCTGCC GATCGTCCTC
AAGGGGATCA TGACGGCGGA GGACGCCGCG CTCGCCGTCG AGCATGGCGC CGACGCGATC
ATCGTCTCGA ACCACGGCGG GCGGGTGCTC GACGAGGGCC TGGCCACCGC CGAGGCGCTG
CCCGCGATCG TCGCCGCCGT CGCGGGACGC ATCGACGTCC ATGTCGACGG CGGCATCCGC
AGCGGGGCGG ACATCGCCAA GGCGCTGGCA CTGGGGGCCA GGACCGCGCT GATCGGCCGT
CCCGCACTCT GGGGCATCGC GGCCGACGGC GACGAGGGGC TGGCGGCGAT GCTCGACCTG
CTGCGCGGCG AGCTGCGCTC GGTGATGGGG ATGATCGGGG CCGGGTCGGT CGCCGCTATC
GACCGCTCGT CGATCGTGGA GCGGTAA
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| Protein sequence | MDALHHVDDF ERVAIDRMTP EARDLANLGA GEGKAVARNR AAWGRWALRQ RVLRDVGTCD
TAVDLFGVPV SMPLLIAPSG LHGLVHPDAE SATARAAQAA DTLMVLSMNS TLPVEEVAPH
CDKFWFQLYW GADRGFLREL MARAAGAGAK AFCLTLDMPV RPWLLGPMRR ALAAVGDVRP
AHGFPRSGHL QDDARWDHDA RLTWADLSWL RANSPLPIVL KGIMTAEDAA LAVEHGADAI
IVSNHGGRVL DEGLATAEAL PAIVAAVAGR IDVHVDGGIR SGADIAKALA LGARTALIGR
PALWGIAADG DEGLAAMLDL LRGELRSVMG MIGAGSVAAI DRSSIVER
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