| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4241 |
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| Symbol | |
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| ID | 5197660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4673936 |
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| End bp | 4674931 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640583795 |
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| Product | luciferase family protein |
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| Protein accession | YP_001264719 |
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| Protein GI | 148557137 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.00842618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGGCGC TTTATGCGGA CCGGCTCGAT TTCGCGCGGG CGGCCGAGCG GTTCGGCTTC
GCGGCCTATT ATGTCGCCGA GCATCATTCG ACGCCGCTGG GCCACGCCTC CTCGCCCAGC
GTCTTCCTGG CGGCGCTGTC GCAGCACACC GCGACCATGC GGATCGGATC GATGGTGCAT
GTCCTGCCGG CCTATCAGCC GCTCCGCCTC GCGGAGGAGA TCTGCATGCT CGATCATCTA
AGCAACGGCC GGCTCGACAT CGGCGTCGGC CGGGGGGCTT CCCCCTATGA GGTCGGACTG
TTCGGCATCG GCACGCAGGA CGCCCGCGCG GTGTTCGAGG AGGCGCTGAC GGTGATCCGC
GCCTTCCTGC GGGAGGACGT GCTGTCGCAT CGCGGCGAGT TCTTCACCTA TCGCGACATC
CCGCTGACGA TGCGGCCGTT GCAGCCGGGC GGGCCGCCCA TGTGGTATGG CGCCTTTTCC
GAGCGCAACC TCCGTTTCGC GGCGGCGCAT GGCCTCAATG TCACGTTGAG CGGCCCGCCG
CAGCGGCTGC GCGAGCTGTC GTCGCGCTAT CGGGCCATCT GGCGGGAATT GCATGAAGGC
GCGCCGCCGC CCGGCATGGC GAGCATGTAC CAGATGTTCG TCGCGCGGAG CGACGAGGAG
GCCGCCCGGA TCGTCGCGCC GGCCTATGCG AAATGGTATG AGAGCATGAC GCAGCTGTGG
CGCCACAACA ATGCGATGCC GCGCGAGACG CTGCCGCCGA CCTTCGAGCA GGCGATGCGG
CAAGGGTCGA TCATCGCGGG CAGCGCCGAG ACGGTGCGGC AGCGGATGCA GCAGTTGCTC
GACGCGAGCG GGCTCGACCG GTTGCTGCTC CAGTGCAATC TGGGGACGAT GCCGCATCAG
GCGGCGTTGG AATCGCTGCA ATGCTTTCAC GAGGAGGTCG CCCCGCATCT GCACGTCGCC
CCCCGCACCG ACGGCTTCGA GGCGGATGCG GCCTGA
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| Protein sequence | MAALYADRLD FARAAERFGF AAYYVAEHHS TPLGHASSPS VFLAALSQHT ATMRIGSMVH
VLPAYQPLRL AEEICMLDHL SNGRLDIGVG RGASPYEVGL FGIGTQDARA VFEEALTVIR
AFLREDVLSH RGEFFTYRDI PLTMRPLQPG GPPMWYGAFS ERNLRFAAAH GLNVTLSGPP
QRLRELSSRY RAIWRELHEG APPPGMASMY QMFVARSDEE AARIVAPAYA KWYESMTQLW
RHNNAMPRET LPPTFEQAMR QGSIIAGSAE TVRQRMQQLL DASGLDRLLL QCNLGTMPHQ
AALESLQCFH EEVAPHLHVA PRTDGFEADA A
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