Gene Swit_4235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4235 
Symbol 
ID5199422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4669129 
End bp4669887 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content72% 
IMG OID640583789 
Productalpha/beta hydrolase fold 
Protein accessionYP_001264713 
Protein GI148557131 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.125145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CCGACCGCTT CGTCCAGCTC GACGGCGGGC GCATCCATTA TCTGGAAGCC 
GGCGAGGGCG CGCCCCTGCT GCTGCTCCAC ACCGGCGGCG CCTCCGCGCA GGAGTTCGAG
GACGTCATCC CGCTGCTGGC CGAGCGCCAC CGCGTGATCG CCTGGGACAT GCCGGGCCAC
GGCGATTCCG ACCGGCTGTG GCGGCAGCGC GGCATCGAAC ATTATGCCGA CAACCTGCGC
GCCTTCCTCG ACGCGCTCGC CATCGACCGG GCGATCCTCG TCGGCGTGTC GATCGGCGGC
TATATCGCGA TGGACTTCGC GCGCCGCTGG CCCGAACGGG TCGAGCGCGC CGTGCTGGCC
GAGGCGCCGC TGCGGTCGCC GGCATGGTAT GCCGAGAACT GGCCCGCCTT CGAGGCGATG
TGCGCGATCC CAACCACCAG CTTCGAGGCC GCCGCCAGGC GCTTCCGCGC GCTGACCCCG
GCGCAGCACG AGCGGTGGAA CATCGACCGC AACAAGGCGG GAAGCTGGAC GATGGTCAGC
ATCGCCTGGT CGGTCCGCGA CTTCGACGCC GCCGCCGCCC TCGCCGCGCT CAGGGTCCCG
CTCACCGTCG CGATGGGCGC GACGGGGCCG ACGGCGCACG AACTCGATCG CTGGCGATCG
ATCCAGCCCG CCGCGACCTA CCGGCTGCTC GACGGCTGCG GTCATTTCCC GATGATCGAC
GACCCGGCCG CCTTCGCCGA AGCCGTCGAG ACCCGATAG
 
Protein sequence
MTATDRFVQL DGGRIHYLEA GEGAPLLLLH TGGASAQEFE DVIPLLAERH RVIAWDMPGH 
GDSDRLWRQR GIEHYADNLR AFLDALAIDR AILVGVSIGG YIAMDFARRW PERVERAVLA
EAPLRSPAWY AENWPAFEAM CAIPTTSFEA AARRFRALTP AQHERWNIDR NKAGSWTMVS
IAWSVRDFDA AAALAALRVP LTVAMGATGP TAHELDRWRS IQPAATYRLL DGCGHFPMID
DPAAFAEAVE TR