Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4235 |
Symbol | |
ID | 5199422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4669129 |
End bp | 4669887 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640583789 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001264713 |
Protein GI | 148557131 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.125145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCA CCGACCGCTT CGTCCAGCTC GACGGCGGGC GCATCCATTA TCTGGAAGCC GGCGAGGGCG CGCCCCTGCT GCTGCTCCAC ACCGGCGGCG CCTCCGCGCA GGAGTTCGAG GACGTCATCC CGCTGCTGGC CGAGCGCCAC CGCGTGATCG CCTGGGACAT GCCGGGCCAC GGCGATTCCG ACCGGCTGTG GCGGCAGCGC GGCATCGAAC ATTATGCCGA CAACCTGCGC GCCTTCCTCG ACGCGCTCGC CATCGACCGG GCGATCCTCG TCGGCGTGTC GATCGGCGGC TATATCGCGA TGGACTTCGC GCGCCGCTGG CCCGAACGGG TCGAGCGCGC CGTGCTGGCC GAGGCGCCGC TGCGGTCGCC GGCATGGTAT GCCGAGAACT GGCCCGCCTT CGAGGCGATG TGCGCGATCC CAACCACCAG CTTCGAGGCC GCCGCCAGGC GCTTCCGCGC GCTGACCCCG GCGCAGCACG AGCGGTGGAA CATCGACCGC AACAAGGCGG GAAGCTGGAC GATGGTCAGC ATCGCCTGGT CGGTCCGCGA CTTCGACGCC GCCGCCGCCC TCGCCGCGCT CAGGGTCCCG CTCACCGTCG CGATGGGCGC GACGGGGCCG ACGGCGCACG AACTCGATCG CTGGCGATCG ATCCAGCCCG CCGCGACCTA CCGGCTGCTC GACGGCTGCG GTCATTTCCC GATGATCGAC GACCCGGCCG CCTTCGCCGA AGCCGTCGAG ACCCGATAG
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Protein sequence | MTATDRFVQL DGGRIHYLEA GEGAPLLLLH TGGASAQEFE DVIPLLAERH RVIAWDMPGH GDSDRLWRQR GIEHYADNLR AFLDALAIDR AILVGVSIGG YIAMDFARRW PERVERAVLA EAPLRSPAWY AENWPAFEAM CAIPTTSFEA AARRFRALTP AQHERWNIDR NKAGSWTMVS IAWSVRDFDA AAALAALRVP LTVAMGATGP TAHELDRWRS IQPAATYRLL DGCGHFPMID DPAAFAEAVE TR
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