| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4231 |
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| Symbol | |
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| ID | 5199418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4663447 |
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| End bp | 4665777 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640583785 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264709 |
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| Protein GI | 148557127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA AGTCGATCCA GGGAGCGTCA TTGGCGGCCG TGCTGGCGGG GGTCCTGCTA
CAGGCCCCGG CCTGGGCGGC CGACCGCGAG GCCGATGCCG CCGCCGACAG CGGCGAGATC
ATCGTCACCG CGCAGAAGCG CGCCGAGCCG CTCCAGAAGG TCCCGGTCTC CGCCGCGGTC
GTCTCGGGCA TCACCCTCCA GAAGCAGGGC GTCGGCTCGA TCCAGGACGC GATGCAGCAT
GTGCCGGCGG TCTATGTGTC GCAGGCCGGC CCCGCCAACC TGCTGTTCAT CCGCGGCGTC
GGATCGGGCG ACAACAACCC GCTGTTCGAG CAGTCGGTCG CGACCTTCGT CGACGGCATC
TATCGCGGCC GCTCGCGCTC GACCCAGTCC TCCTTCCTCG ACATCGAGCG GGTCGAGGTG
CTGAAGGGGC CGCAGAGCGT CTATTTCGGC AACAACTCGA TCGCGGGCGT GTTCAACATC
GCCACCAGGA ATCCCGGCGA CCATTGGGAA GGCTATGTCC GCGGCCTGTA TAATTTCAAC
TTCGACAATG CGACGATCGA GGGCGCGGTC GGCGGGCCGG TCACCGACAC GCTCGGCATC
CGCGTCGCCG GGCTGGTCCA GCGCGGCGAT GGCTGGCTGC TCGACAAGAG CAGCGGCATC
CACATCCCGC GCGTCCGCAA CTATGCGGGC CGGGTCACGC TGCTGTGGAA GCCGACCGAC
CGACTGTCGG TCAACCTGAA GGCGCATGCC GAGCGTGGAC GCCAGAAGGG CGGCCTCGCC
GCCAAGCTGA CGAGCTGCCC GCCGCTGCCG ATCTTCACCA ACGTCAATTT CGGCTGCACC
GCGGCGATCG CCGCCGGCGA CGACACCCGC CCCAATTATG TCCGCACCCA GAACCCGGAC
CAGGGCATCG ACTTCGACGC CCAGTCGGCG ATCTCGACGA TCAGCTATGA GGCCGATCCG
TTCACGCTGA CCTCGGTCAC CGGCTATTAC CACCACAAAT ATAATCTGAA GCTCGACGTC
GACGCGGCGA GCCCCGACCT GGCCAACTTC ACCGTTCCCG AGCGGTTCAG CCAGTTCAGC
CAGGAATTCC GCGTCGCGTC GAACGGCACC GGCCCGTTCG ACTATATGTT CGGCGCCTAT
TATGAGCACG ACAAGCTGCG CGGCCAGATC TACGCGAATT ACGGCCTGTT CTCGCCGATC
CTGCCGGGCC TCGTGCCGCC GCTGGCGCCC TATCTGCCGT TCGGCCAGGC CGACGATTTC
CGCCAGACCT CCGACATATA CGGCCTGTTC GCGAGCGTCG TCGTCCGCCC GACCGACAAG
CTCGACGTCA CGCTGGCGGC GCGCCAGTCC TGGGTCGACA AGCATTTCGG CATCAACCAG
TATTTCGGCA TGGCGACGCA GCCCTTCGGC CCGATCGTCC CGCTGCCGGC GGCGCTGGCG
CCGATCGCGG CCGCCGTCGG AAAGCAACTC GGCCTCGGCG TCGCCGGCTA CCGCGCCGAG
AACCGGTCGG ACGCGCATTT CAGCCCGTCG ATCACCGTCG GCTACGACTT CACGCCTGAG
ATCCGCGGCT ATGCCAAATA TGTGAACGGC TTCAAGGCGG GTGGCTATAA CGGCCTCGAG
CATACCGGCC TGCCGGGCAC GCTGTCCTTC GGGCCCGAAT ATGTCGACTC CTACGAAGTC
GGCCTGAAGA CCCAGTGGTT CAACCGCCGC CTGACCTTCA ACATCGCGGC CTTCCGCAGC
GATTTCGAAG GGCTCCAGCA GTCGGCGATC GGCACCAACG GCGTGCAGGG CGGCATCTTC
CCGGTCGTGC GCAACGCCAA GGGCGCGCGC TCGCAGGGGA TCGAGACCGA CATGGCCTGG
CGCGTGAACG AGCATTGGAA CACCAGCCTC AGCCTCACCT GGCTCGATTC CAAGTTCACC
GATTTCAAGA ATGCCGGCGG ATCGCCGACC GACATCGCGC TCGGCCATCC GACCATCGAC
CTTTCGGGCA AGCGCGGGCG CTACGCTCCC GAGCTGAGCG GCAACTTCAA CGTCGAATAT
ATGTTCGACG TCGGGCCGTC GCTGCAGGTC AGGCTGCGGC CGGAGGCGAT GTTCACCACC
CGCTACAACA TCTCGCCAAA CAACGATCCG CTGTTGTGGC AGGAGGGTTT CGTCAAGCTC
GGCGCGACCG TCTCGGTGGC CAATCCGTCG CAGGGCTGGG AGTTCTCGGT CATCGGCAAG
AACCTGACCG ATCGCCGGAT CATGAACTTC GAAGCGGGGA GCAACGGCTC CTACATCATC
GGCACCGAGG AGCCGTGGAG CATCTCTGCC CAGCTCCGAT ACAATTTCTG A
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| Protein sequence | MKKKSIQGAS LAAVLAGVLL QAPAWAADRE ADAAADSGEI IVTAQKRAEP LQKVPVSAAV
VSGITLQKQG VGSIQDAMQH VPAVYVSQAG PANLLFIRGV GSGDNNPLFE QSVATFVDGI
YRGRSRSTQS SFLDIERVEV LKGPQSVYFG NNSIAGVFNI ATRNPGDHWE GYVRGLYNFN
FDNATIEGAV GGPVTDTLGI RVAGLVQRGD GWLLDKSSGI HIPRVRNYAG RVTLLWKPTD
RLSVNLKAHA ERGRQKGGLA AKLTSCPPLP IFTNVNFGCT AAIAAGDDTR PNYVRTQNPD
QGIDFDAQSA ISTISYEADP FTLTSVTGYY HHKYNLKLDV DAASPDLANF TVPERFSQFS
QEFRVASNGT GPFDYMFGAY YEHDKLRGQI YANYGLFSPI LPGLVPPLAP YLPFGQADDF
RQTSDIYGLF ASVVVRPTDK LDVTLAARQS WVDKHFGINQ YFGMATQPFG PIVPLPAALA
PIAAAVGKQL GLGVAGYRAE NRSDAHFSPS ITVGYDFTPE IRGYAKYVNG FKAGGYNGLE
HTGLPGTLSF GPEYVDSYEV GLKTQWFNRR LTFNIAAFRS DFEGLQQSAI GTNGVQGGIF
PVVRNAKGAR SQGIETDMAW RVNEHWNTSL SLTWLDSKFT DFKNAGGSPT DIALGHPTID
LSGKRGRYAP ELSGNFNVEY MFDVGPSLQV RLRPEAMFTT RYNISPNNDP LLWQEGFVKL
GATVSVANPS QGWEFSVIGK NLTDRRIMNF EAGSNGSYII GTEEPWSISA QLRYNF
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