| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4227 |
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| Symbol | |
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| ID | 5198640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4659411 |
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| End bp | 4660241 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640583781 |
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| Product | 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase |
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| Protein accession | YP_001264705 |
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| Protein GI | 148557123 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.327652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCTA TGTCTCGCGC TTCGACTGAT CGCGCGATGC GGATCGTCCG CTTCCGCTAT
CTGGGCCGCC GCCGCTACGG CCTGCTCGAC GGCGACGGCG TCCGCCCGCT GTCGACCAGC
CCGTTCCGCG CGTTCCAGCA GGGGCGCGAC CTGGCCGAAT GCGTCGAGGA CGGAGTCCTG
TTCGGCCGCG ATGAGGTCGT CCTGCTGCCG CCCTGCGCGC CCGGCAAATA TGTCGGGATC
GGCATCAACT ATCGCGCCAC CGCCGAGGCG CTCGGCATGG CCATGCCCGA GGAGCCGGTC
GTCTATGTCC GTCCGCCGAA CTGCATCATC GGCGACGGCG ACCGGATCGT GCTGCCCGCC
GACGGCGACG TGGTGTGCGA GGGCGAGCTC GCGGCGGTGA TCGGCCGGCG GGGGCGGGAC
ATCGCCGAGG GCGACGTCGC CGCGCACGTC ATCGGCTACA CGCTGACCAA CGACCTGATG
GACGTCGCCC GGTTCCACAA GGACAAGGGC AATCCGAGCC TCGCCAAGGG ACGCGACGGC
TTCGCCCCGC TCGGCCCCTG CATCGCGACC GGGCTCGACC TCGCGACGGC GGAGCTGGCG
ACCTTCGTCA ACGGCGCGCG GGTGCAGGCG GGCTTCGCGC GCGACATGCT GTTCGGCGTC
GAACGCTGCG TCAGCCACAT CTCGCGCTTC ATGACGCTCG AGCCGGGCGA CGTGGTCGCG
CTGGGCTGTC CGCCCACGCC CGCGCGGATC GCGCCGGGCG ATCGCATCGA AATAGGCTGC
GCGCCGATCG GGACGCTCGC GAACGAGGTC GCGGGCGCGC CGCGGACATA A
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| Protein sequence | MAAMSRASTD RAMRIVRFRY LGRRRYGLLD GDGVRPLSTS PFRAFQQGRD LAECVEDGVL
FGRDEVVLLP PCAPGKYVGI GINYRATAEA LGMAMPEEPV VYVRPPNCII GDGDRIVLPA
DGDVVCEGEL AAVIGRRGRD IAEGDVAAHV IGYTLTNDLM DVARFHKDKG NPSLAKGRDG
FAPLGPCIAT GLDLATAELA TFVNGARVQA GFARDMLFGV ERCVSHISRF MTLEPGDVVA
LGCPPTPARI APGDRIEIGC APIGTLANEV AGAPRT
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