| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4225 |
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| Symbol | |
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| ID | 5200389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4655588 |
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| End bp | 4657354 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640583779 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_001264703 |
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| Protein GI | 148557121 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.237131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGATCG AACCCCACAT GTTGGCCATC CTCGCGAGGA AGTTCAACGT GATCGTCAAC
GAGATGAACC ACACGCTGGA GAAGGTGTCG CGGTCGGCGG CGCTCAATCT CGCGAAGGAT
TTCTCGTCGG CGGTGCTGAC CAGCGAGGGC GACCTGTTCT GCCTGACCCA GGCGATCCCG
ATCATCGTCG CGTCGTGCAG CATGGCGGCG AAGCAGATGA CCGGCCTGTT CGGCGATCTC
CGCCCCGGCG ACTGCTTCCT CAACAATTCG CCCTATTACG GGTCGAGCCA CCATGGCGAC
TTCGCCTATA TGGCGCCGGT CTTCTACAAG GGCGAGCATA TCCTGACGAC GCTGAGCGTC
GCCCACCAGG CCGATATCGG CAACAGCCAG CCGACCACCT TCATGCCCTT CGCGAAGGAC
CTGTACGAGG AAGGCGCGCT CGACTTCCCC TGCGTCCGCG TCCAGCGCGA CTATGCCGAC
GTCGAGGACG TGGTGCGGAT GGCGAAGATC CGCATCCGCA ACCCCGAGCA ATGGTATGGC
GACTATCTGG CGGCGGTCGG CGCGGTGCGG ATCGGCGAGA AGCGGATCAT CGAGCTGTGC
GACAAATATG GCGCCGCGAC GATCAAGGCG TTCCTCGCCG AATGGCAGGA CTATTCGCGC
CGCCGCATGG TCGACGAGAT CGGCAGGCTG CCGCGCAGGA GCTGGGAAGC CACCAATGCG
CATGATCCGA TCGAGGGGCT GGCGCCCGAC GGCATCCCGC TCAAGGTCAA GCTCTCGATC
CTGCCCGAGG AGGGCAAGAT CCAGGTCGAC CTGCGGGACA ATATCGCCTG CCTGGAAGCC
GGCTATAATC TGAGCGAGGC GACCACCCGC TCGGCGGTCG TCACCGGCAT CCTCAACAAC
CTGTCGTCCG ATCTGCCGCG CAACGACGGC GTCTATAACT GCATCGAGAT ATTGGCGCGC
GAGAATGCGA TCGTCGGCGG GGTGCAGCCG CCCTACAGCA CGTCGATGGC GACGGTCGGC
GTCGCCGCGC GGCTGATCAA CCTGATCCAG TCGATGTTCG CGGAACTGGG GCCCGACAAG
GGGCTCGCCG AGGGGGCGAC CTCGTTCAGC CCGAGCGTCG CCTCGGTCTG CGGCAAGGAT
TTCCGCTATG ACGACCGGCT GTTCGTCAAC GCCGTGATCT ACGGCTTCGG CGGCGGGCCG
GCGCTGCACG GCCATGACGG CTGGCTGACC TATCTCGGCC CGCCCGGCGG CTGCCAGGTC
GACTTCATCA GCGCCGAGAT CTTCGAGCTC AAGATGCCGA TCCTGTTCGG CTGCTGCGAG
GTCGAGACGG ACAGCGGCGG CGCGGGCGAA TGGGACGGCG CGCCCGGCAT ACGCTGCCTG
ATGCGGCCGC GCGGCAACCC GGCGCTCTGG TCCTATTTCC TCGATTCCAA GGTCTTCCCG
CCCAAGGGGC TGCACGGCGG CCATGCCGGC GCGCCGTCGG CCGCGTGGAA GGTCGACGCG
GCCGGCAACG AGGTCGCGAT CCCCGACATC TCCAGCGAGG AGATCCAGCC GACCGAATGG
ATCGGCAGCC TGTGGCCGGG CGGCGGCGGC TTCGGCGATC CGCTCGACCG CGATCCCGAA
CGGGTGCGCC ACCGGGTGCG CAACGGCTGG GTCTCGCCCG AAAAGGCGCG GGGGGTCTAC
GGCGTCGCGC TCGACCTGTC GGGCGAGGAC TATCGCGTCG ACCAGGAGCG GACCGCGCAG
CTCCGCCTGG AACTCCGGAA TAGATAA
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| Protein sequence | MKIEPHMLAI LARKFNVIVN EMNHTLEKVS RSAALNLAKD FSSAVLTSEG DLFCLTQAIP
IIVASCSMAA KQMTGLFGDL RPGDCFLNNS PYYGSSHHGD FAYMAPVFYK GEHILTTLSV
AHQADIGNSQ PTTFMPFAKD LYEEGALDFP CVRVQRDYAD VEDVVRMAKI RIRNPEQWYG
DYLAAVGAVR IGEKRIIELC DKYGAATIKA FLAEWQDYSR RRMVDEIGRL PRRSWEATNA
HDPIEGLAPD GIPLKVKLSI LPEEGKIQVD LRDNIACLEA GYNLSEATTR SAVVTGILNN
LSSDLPRNDG VYNCIEILAR ENAIVGGVQP PYSTSMATVG VAARLINLIQ SMFAELGPDK
GLAEGATSFS PSVASVCGKD FRYDDRLFVN AVIYGFGGGP ALHGHDGWLT YLGPPGGCQV
DFISAEIFEL KMPILFGCCE VETDSGGAGE WDGAPGIRCL MRPRGNPALW SYFLDSKVFP
PKGLHGGHAG APSAAWKVDA AGNEVAIPDI SSEEIQPTEW IGSLWPGGGG FGDPLDRDPE
RVRHRVRNGW VSPEKARGVY GVALDLSGED YRVDQERTAQ LRLELRNR
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