| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4221 |
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| Symbol | glpD |
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| ID | 5200385 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4650527 |
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| End bp | 4652059 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640583775 |
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| Product | glycerol-3-phosphate dehydrogenase |
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| Protein accession | YP_001264699 |
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| Protein GI | 148557117 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.399565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTCGG CGGTCGACCT GCTGATCGTC GGCGGCGGCA TCAACGGTGC GGGCATCGCC
CGCGACGCGG CCGGGCGCGG TCTGTCGACG ATGCTCGTCG AGCAGGACGA CCTCGCCGCC
CACACCTCCT CGGCCAGCAC CAAGCTGATC CATGGCGGCC TGCGCTACCT GGAATATCAC
GAGTTCCGGC TGGTGCGCGA ATCGCTGCAG GAGCGCGAGC GGCTGATGGC GATCGCCCCG
CACCTGATCG CGCCGCTCGA CTTCTTCCTC CCCCATGCCG CCGGGCAGCG GCCCGCCTGG
ATGATCCGCG CCGGGCTGTT CCTCTACGAC CATCTCGCGC GACGCCGCCG GCTGCCCGCG
TCGCGCGCCG TTTCCGCCCC GCATCATCCC GGCTTCGCCG TGCTCCAGCC CGGCTACCGG
CGCGGCTTCA CCTATGCCGA CTGCCGGGTC GACGACAGCC GGCTGGTGGT GCTCAACGCG
CTCGACGCCG CCGAGCGCGG CGCGACGATC CGCCCCTATA CCCGGCTGCT GTCGGCCCGC
CGGGCGGGCG CCGTCTGGCA GGCCGAGATC GAGGACCGCG CCTCGGGCGC GCGGACGACC
GTCGCCGCCC GCGCGATCGT CAACGCCGCC GGCCCCTGGG TCGCGGAGCT GCTCGAGACC
CGTCTCGGCC GGCACGACGC CGACCGCATC CGCCTGGTCA AGGGCAGCCA CATCATCGTT
CCGCGCCGCT TCGACGGGGA CTATGCCTTC ATCCTCCAGA ATCCCGACGG CCGGGTCCTG
TTCGCCATCC CCTATCAGGA CCGCTTCACG CTGATCGGCA CGACCGACAT CCCCTATGAG
GGGCATCCGG CCGACGTCGC GATCTCCGAG CAGGAGGTCG CCTATCTCTG CGCGAACATC
TCGGACTATT TCCGTACGCC GGTGACGCCG GCCGACGTCG TCCACAGCTT CTCCGGCCTG
CGCGCGCTCC ACGACGACGG AGCGGCCAGC GCATCGGCGG TCACCCGCGA CTATCTCCTC
GCCCTCGACG GAGGCGGCGG CGAAGCCCCG CTGCTGTCGG TGTTCGGCGG CAAGATCACC
ACCTATCGCC GCCTCGCCGA GCATGCGATG GCGAAGCTGC TGCCCGCGCT CGGCCGCCCC
GTCGCGCCGG GCTGGACCGC GCAGGCGCCA CTGCCCGGCG GCGACATCGG CGACGGATGC
TTCGACGCCT GGTCGGATGC GCTCGTCGCA AGCCGCCCCG GCCTGCCGCC CGCGCTGCTG
CGCCGCCTCG GCAAGGCTTA TGGAACGCGG GTCGAGACGC TGCTCGGCGG CGCCGCGACG
ATGGACGACC TCGGCGCGGA CCTCGGCGCT GGCCTGACCG AGGCCGAGGT CGACTATCTC
GCCGCCCATG AATGGGCGCG GCGCCCCGAC GACATCCTCT GGCGGCGCTC GAAGCTCGGC
CTGCACGTCC CGCCCGGCAC CGCCGCGCTG GTCGCGCAAC GGCTGGACCG CATCGCCGCG
CCGCCGCTTT CGCCACAAGG GAAGAACCCA TGA
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| Protein sequence | MTSAVDLLIV GGGINGAGIA RDAAGRGLST MLVEQDDLAA HTSSASTKLI HGGLRYLEYH
EFRLVRESLQ ERERLMAIAP HLIAPLDFFL PHAAGQRPAW MIRAGLFLYD HLARRRRLPA
SRAVSAPHHP GFAVLQPGYR RGFTYADCRV DDSRLVVLNA LDAAERGATI RPYTRLLSAR
RAGAVWQAEI EDRASGARTT VAARAIVNAA GPWVAELLET RLGRHDADRI RLVKGSHIIV
PRRFDGDYAF ILQNPDGRVL FAIPYQDRFT LIGTTDIPYE GHPADVAISE QEVAYLCANI
SDYFRTPVTP ADVVHSFSGL RALHDDGAAS ASAVTRDYLL ALDGGGGEAP LLSVFGGKIT
TYRRLAEHAM AKLLPALGRP VAPGWTAQAP LPGGDIGDGC FDAWSDALVA SRPGLPPALL
RRLGKAYGTR VETLLGGAAT MDDLGADLGA GLTEAEVDYL AAHEWARRPD DILWRRSKLG
LHVPPGTAAL VAQRLDRIAA PPLSPQGKNP
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