| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4211 |
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| Symbol | |
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| ID | 5199630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4639396 |
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| End bp | 4640673 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583765 |
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| Product | 4-aminobutyrate aminotransferase |
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| Protein accession | YP_001264689 |
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| Protein GI | 148557107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
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| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.225868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGCA ACGCGGATCT TCTGGCACGC CGCCGTCAGG CGGTGGCGCG CGGGGTCGCC
ACGGCCTTTC CGATCTTCGC GGCCCGCGCC GACAATGCCG AGATCTGGGA CGTCGACGGC
CAGCATTATG TGGATTTTGC CGGCGGCATC GCCGTGCTCA ACACCGGGCA CCGCCACCCC
AAGGTCATCG CCGCCGTGCA GGAGCAGTTG GCGCTCTACA CCCATATGGC GTTCCAGGTC
GCGGCCTATG AACCCTATGT CGCGCTCGCC GAGCGGTTGA ACGCGCTCGC GCCCTTCACC
GGCGAGGCGA AGACGATCCT GTTCACCACC GGAGCCGAGG CGACCGAGAA TGCGGTCAAG
CTGGCGCGGG CGGCGACCGG CCGGTCGGCC GTGATCGCCT TTGGCGGCGG CTTCCATGGC
CGCACCCTGC TGGCGATGGC GATGACCGGC AAGGTCGCCC CGTACAAGCA GCAGTTCGGG
CCGATGCCCG GCGAGATCTT CCATGTCCCC TTTCCGGTCG CGGCGCATGG CGGCAGCGTC
GAGGAGACGC TGCGCGCGAT CGAGATGGTC TTCAGGGTCG CCGTCGAGCC GGGCCGGGTC
GCCGCCCTGA TCATCGAGCC GATCCTGGGG GAGGGCGGCT TCTACGAGGC TCCCGTCGAA
CTGCTCAGGG CGTTGCGTGC CCTCTGCGAC CGGCACGGCA TCATCCTGAT CGCGGACGAG
GTCCAGACCG GCTTCGGACG GACCGGGCGG ATGTTCGCCA TCGAGCATTC GGGGGTCGAG
CCCGACCTCG TCACCGTCGC CAAGTCGCTG GCCGGGGGTT TCCCGCTCTC GGGCGTGATC
GGTCGATCCG CGATCATGGA GGCGAGCGAG CCGGGTGGAA TGGGCGGCAC CTATGGCGGC
AACCCGGTCG CCTGCGCGGC GGCGCTCGCC GTGCTCGACG TGATCGCGGA GGAGCAACTG
CTCGACCGCG CGGTCGCGAT CGGGGCGCGG ATCAAGGAGC GGCTGCGGCT GTTGGCGCGG
CGCAACGACC TCGTGCCGAT CACCGAAATC CGCGGACCCG GCGCGATGAT CGGCTTCGAC
ATCGTCACTT CGCGGACCGG CTATGAGCCC GACCCCGAGA CGACGCGCCG GGTCGTCGAG
GCGGCGCGCG AGGCGGGATT GATCCTGCTG TCCTGCGGCA TCCACGGCAA CGTCATCCGG
ATATTGGTGC CGCTGACCGT TCCGGACGAT ATCCTCGATG CCGGGCTCGC CAAGCTCGAA
CAGGCGCTGG CGGCATGA
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| Protein sequence | MTSNADLLAR RRQAVARGVA TAFPIFAARA DNAEIWDVDG QHYVDFAGGI AVLNTGHRHP
KVIAAVQEQL ALYTHMAFQV AAYEPYVALA ERLNALAPFT GEAKTILFTT GAEATENAVK
LARAATGRSA VIAFGGGFHG RTLLAMAMTG KVAPYKQQFG PMPGEIFHVP FPVAAHGGSV
EETLRAIEMV FRVAVEPGRV AALIIEPILG EGGFYEAPVE LLRALRALCD RHGIILIADE
VQTGFGRTGR MFAIEHSGVE PDLVTVAKSL AGGFPLSGVI GRSAIMEASE PGGMGGTYGG
NPVACAAALA VLDVIAEEQL LDRAVAIGAR IKERLRLLAR RNDLVPITEI RGPGAMIGFD
IVTSRTGYEP DPETTRRVVE AAREAGLILL SCGIHGNVIR ILVPLTVPDD ILDAGLAKLE
QALAA
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