Gene Swit_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4202 
Symbol 
ID5199965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4628206 
End bp4629231 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID640583756 
Productalcohol dehydrogenase 
Protein accessionYP_001264680 
Protein GI148557098 
COG category[R] General function prediction only 
COG ID[COG2130] Putative NADP-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.337989 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCATG CATGGGTCCT GACCTCACGG CCCAAAGCCG TTCCGGTCGC GAGCGACTTC 
GATCTGGTCC CGATTCCCGA TCGCCCCCTG GAGGACGGTG AGATCCGGGT GCGTAACCGC
TGGCTCTCGG TCGATCCCTA TATGCGCGCC CGGATGAATG CGGGACACGG CTATATGCCG
CCATTCATCC TGGGCGAGCC GATGACGGGC CGGGCGCTGG GCGATGTCGT CGAAAGCCGC
CATGCGGGGT TCAAGCCCGG CGACGTCGTG TCGCACATGG CCGGATGGCG CGACGAGGCG
ATCGTGGGGT CTTCGCTCGA CCCTTGGAGA ATCCCGTTCA GCGACGTCCC GGAGACGGCC
TGGCTGAACG GTCTTGGTGC GGCAGGGCTG GCGGCCTGGG TCGGGCTGGC CGTCATTGCC
GACGCTCGTG CGGGCGAAAC GCTTTTCGTG TCCGCCGCCG CCGGCGCGGT GGGATCGGTG
GTGGTGCAAC TGGCCAAGGC CTGGGGCCTC CGCGTCGTCG CGTCGGCCGG CGGGCCGCGC
AAGGCGGCCT GGGCGCTGGA ACTGGGCGCC GACCATAGCA TCGATTACAA GCGGGACCCG
CTACTGGAAA CGCTGGGCGC GGCGGCGCCG GACGGCATAG ACATCTATTT CGACAATGTG
GGCGGGGCCC ATCTGGATGC GGCGCTCGCC GTCTCGCGAC GAGGCGCGCG CGTGGCGATC
TGCGGCATGA TCGATAGCTA TAATGGCGAA AGGCCGTTGG AGCTTCGCCA CGCCGGACGG
CTGATCGCGG CGCGAATCCG AATGGAGGGC TATCTGGTGT CGGACCATAT GGGCGCCCGG
GATCGCTTCC TGGCCGAGAT GATCCCCCTT GTCCGCGATG GTCGGATCCG AAACCGCGAA
ACCGTCCGAC AGGGTCTTGC GGCGATGCCG GAGGCTTTCC TTGGCCTGTT CGACGGGATG
AATATCGGGA AGATGCTCGT TGAGATTCCC TGGCGCGGGG ATGGCGGGGC CAAGGCTCTG
CCCTGA
 
Protein sequence
MAHAWVLTSR PKAVPVASDF DLVPIPDRPL EDGEIRVRNR WLSVDPYMRA RMNAGHGYMP 
PFILGEPMTG RALGDVVESR HAGFKPGDVV SHMAGWRDEA IVGSSLDPWR IPFSDVPETA
WLNGLGAAGL AAWVGLAVIA DARAGETLFV SAAAGAVGSV VVQLAKAWGL RVVASAGGPR
KAAWALELGA DHSIDYKRDP LLETLGAAAP DGIDIYFDNV GGAHLDAALA VSRRGARVAI
CGMIDSYNGE RPLELRHAGR LIAARIRMEG YLVSDHMGAR DRFLAEMIPL VRDGRIRNRE
TVRQGLAAMP EAFLGLFDGM NIGKMLVEIP WRGDGGAKAL P