| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4197 |
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| Symbol | |
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| ID | 5197250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 4619006 |
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| End bp | 4621114 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640583751 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001264675 |
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| Protein GI | 148557093 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000540128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.065151 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACAAGG CATATTGGCT CCACGCCGCA ATTCTCGGAA GCATGTCAAC GCTTCCAAGC
AATGCCCTGG CACAGAACAG CGATCCGGCG GGAACGGACA ACCCTAATGA AATCGTCGTA
ACGGCGCAGA ATCGCACCGA ACGGCTTCAG GAAGTTCCTA TCCAGGTCAG CGCCCTGAAT
TCGGAAGCCA TCGGCGATGC CGGCATCAAG TCGACCGCCG ATGCGCTGTC GCAGATCGCC
AATGCGAGCT TCGATCGCGG CAATAACTAC CGCAGCAACT ACATCACCAT GCGCGGGCTG
ACCCAGTTGA ACAATGCCGA TCCGCCCGTC GCGTTCGTCG TCGACGGCGT GCCGCAGACC
AACCAGGAGA GCATCGGCGT CGCGCTGTTC GATGTCGAGC GGATCGAGAT CCTCAAGGGT
CCGCAAGGAT CGCTCTATGG CCGCAATGCG GTCGGCGGCG CGATCAACGT CATCACCAAG
GAGCCGACCA ACGACCTGAG CGGCTTCTGG AACCTGGCGG TTTCGAAAGG CGAGACCGTC
GATGCGTCGG CCGGCGTGTC CGGAGCGATC GTCGACGACG TCCTGCTGTT CCGCGTCGCC
ACCACCTACA AGCATTCCGA TGGCCTCATC AGGAACAGCT TCCGCGGCGA TCATTCGGAC
TATATCGACC ATGACTACAC GTTCCGCGGA CGGTTGATCG CCAAGCCGTC GGACGCGCTG
AAGATCGACC TGCGCGCGGA GTATAACAAA TACGCCGCCG GAGGGAATTA CTACTCCGCG
GTCTTTTCGG GCGATCCCAA CGACTTTGTC GACCCCCAGG CCAACCTGCC CGGACTGACG
AGCGGATCCG TCACCGACCT GACCGCGAAG ATCGACTATG ATCTCGACTT CGCGACCCTG
ACGAGCATCT CCAACTATTC GGACTTCAAG CTGTCGGCGC GCTCGGACGG CGACATACGC
AACCCCGTCA CCTCGCCGGG CGGCTTCTTC GGCCTCGGCT TCCAGCTCGG CCAGGGACAG
GATCTGAAGC GCCGGATATT CAGCCAGGAA ATTCGGCTGG TTTCGCGCAG CGACCAGCCG
CTGCGCTGGC TCGTCGGCGG ATATTATCTG GATACCGACC GTTCGCTGCG CTCGCGCTTC
TTCTTCGATT TCAACGGCCA GCCGTCGCAG ATCGACAGTC CGGCCAATCT CTTCCTCGAC
AACAACGAAG GAAACGACAA CCGCGCCTAC GCCTTTTTCG GCCAGGTCGA CTACGACATC
CTGACCAACC TTACGCTGAC GGGCGGGCTG CGCTACGACA ACGACCGGCG CGTCCAGACC
AATCTGAACA GCAACACCGT CCGCAAGGCG CGTTTCGATC GCCTTCAGCC CAAGGTCACC
CTGGCCTGGA AGCCGGGGGA CAACAAGCTG ATCTACGCCA CCTTCGGCAC GGGCTTCCGG
TCGGGCGGCT TCAACGCCCC GAACGCGCCG GTGCCGGTGT TCGCTTCGGA AACGCTCAGC
AATTATGAAG CGGGTTTCAA GACCCAGTTC CTCGACAGGC GCCTGACCGT CAATGGCGCC
GCCTTCCAGA CCGATGTGAA GAATTACCAG TTCTTCTATC TCGACACCGC TTCCGGCGCC
CAGATCATCG ACACGATCGG CAAGGTCCGC ATCCGGGGAC TGGAGCTGGA GCTGATCGCT
TCGCTGGCCG ATCGCCTTGA AGCTTCGGTC GCGGTCGGGG TCATCGACAG CAACATCCGG
AACAGCGTCT TCGCCGCCGA CATCGGCAAC CGCGCGCCCC GGACCGTGCC TTTCTCGACC
ACCTCCTCGC TCCAGTACAA GCCGTCCCTG GGCGGCGACG TCGAAGGGCT GGCGCGCGTC
GAATGGCAGC ATTTCGGCAA GAAATATTGG GGCGCGGACA ACGTCGCCGT CCAGAATCCC
TATGATATCG TCAATGCGCG ACTGGGAGTC AATTTCGGAC AGTTCGGCGT CTATGGCTTC
GTCCGCAACC TGTTGAACGA CAAATATTAT GGCGAGTTCT TCCAGCCGAA ATATTCGGGG
CTGGACATAT TCATCGGCTA TCCCGGGGCG CCGCGAAGCT TCGGCGTCGA AATGAAGATG
AGCTTCTGA
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| Protein sequence | MNKAYWLHAA ILGSMSTLPS NALAQNSDPA GTDNPNEIVV TAQNRTERLQ EVPIQVSALN
SEAIGDAGIK STADALSQIA NASFDRGNNY RSNYITMRGL TQLNNADPPV AFVVDGVPQT
NQESIGVALF DVERIEILKG PQGSLYGRNA VGGAINVITK EPTNDLSGFW NLAVSKGETV
DASAGVSGAI VDDVLLFRVA TTYKHSDGLI RNSFRGDHSD YIDHDYTFRG RLIAKPSDAL
KIDLRAEYNK YAAGGNYYSA VFSGDPNDFV DPQANLPGLT SGSVTDLTAK IDYDLDFATL
TSISNYSDFK LSARSDGDIR NPVTSPGGFF GLGFQLGQGQ DLKRRIFSQE IRLVSRSDQP
LRWLVGGYYL DTDRSLRSRF FFDFNGQPSQ IDSPANLFLD NNEGNDNRAY AFFGQVDYDI
LTNLTLTGGL RYDNDRRVQT NLNSNTVRKA RFDRLQPKVT LAWKPGDNKL IYATFGTGFR
SGGFNAPNAP VPVFASETLS NYEAGFKTQF LDRRLTVNGA AFQTDVKNYQ FFYLDTASGA
QIIDTIGKVR IRGLELELIA SLADRLEASV AVGVIDSNIR NSVFAADIGN RAPRTVPFST
TSSLQYKPSL GGDVEGLARV EWQHFGKKYW GADNVAVQNP YDIVNARLGV NFGQFGVYGF
VRNLLNDKYY GEFFQPKYSG LDIFIGYPGA PRSFGVEMKM SF
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