Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4195 |
Symbol | |
ID | 5198718 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 4616290 |
End bp | 4617414 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640583749 |
Product | hypothetical protein |
Protein accession | YP_001264673 |
Protein GI | 148557091 |
COG category | [S] Function unknown |
COG ID | [COG3535] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0569866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0852747 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACATCA TCAATTCACC GCGCGACGTC CAGGACATGG CCCGTGGCGC CGTCGTGCTG GGCACGGGCG GCGGCGGCGA TCCCTATATC GGCGAGCTGC TCGTGGCGGC GGAGGTCGCC AACGGGAATT TCCCCAAGAT CATAAGCTGC GACGAGATCG GCGACGACGA TTTCGTGCTG GTCTTTGCCG GCGTCGGCGC GCCTTCCATC CTGGTCGAGA ACCTGTTGAG CAAGACGGCG ATGCTGCGCG TGCTGGCCCG CGCCGAGGCG CATTTCGACC GGCGCGTGGA CGCCTTGCTC TGCATGGAGA TCGGCGGCGC CAATTCGATG ATGCCGTTGG CGCTGGGGGC GATCAGCGGG GTGCCCGTCC TCGATGCCGA CGGCATCGGC CGGGCGCTGC CGCAGCTGAA CATGACCACC TTCAGCATCC ACGGCTGCCC GGTCACGCCG TCCATCCTCA TGGAGGAACG CGGCAACGTC GTCACGATCG AGGCCTCCGA CGACAAGATG GCGGAGGATA TCTCGCGCGC CGCGACGATC GCGATGGGCG CCGGCGCCTT CTGCATGATG TATCCGATGT CCGGCAAGCG CGCGCGCGAA GTGACCATCC ACGGCACCAT CAGCCAGACG CTGGAGATCG GACGCGCCAT ACGCGAAGGC CGCAACAGCC ATGGCGACCC CTTCGACAAT CTGCTGCGCT ATCTGAACAG CTGGCCCGAT CGCACCGCGA AGATCATCTT CGACGGCAAG ATCGTCGACG TGACCCACGA GATCCGCAAC GGCTGGCATT GGGGGCAGGC CCGGCTGCAA CCGCTGAACG GCGGCGGGGA CGATTGCGTC ATCGAGATCC AGAACGAATT CACCATCGCC CGCATCAATG GCGAGACCGC GACGATCGTG CCCGACCTGA TCACCGTGCT CGACCGCGAA TCCGCCGAGC CGCTGACATC CGACATGCTC GCCTACGGCC AGCGCGTGAA GGTGCTCTCC TACAGTTGCG ACCCCGTGCT GCGCCGTCCC GAGGCGCTCG ATGTCCTGGG GCCGCGCGCC TTCGGCTTCG ACGAGGACTT CCGGCCGATG GAGGAGCTGC TCGGCCTCCG CGAGCCGCAG CAGGCCGTTG GCTGA
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Protein sequence | MYIINSPRDV QDMARGAVVL GTGGGGDPYI GELLVAAEVA NGNFPKIISC DEIGDDDFVL VFAGVGAPSI LVENLLSKTA MLRVLARAEA HFDRRVDALL CMEIGGANSM MPLALGAISG VPVLDADGIG RALPQLNMTT FSIHGCPVTP SILMEERGNV VTIEASDDKM AEDISRAATI AMGAGAFCMM YPMSGKRARE VTIHGTISQT LEIGRAIREG RNSHGDPFDN LLRYLNSWPD RTAKIIFDGK IVDVTHEIRN GWHWGQARLQ PLNGGGDDCV IEIQNEFTIA RINGETATIV PDLITVLDRE SAEPLTSDML AYGQRVKVLS YSCDPVLRRP EALDVLGPRA FGFDEDFRPM EELLGLREPQ QAVG
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