Gene Swit_4195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_4195 
Symbol 
ID5198718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp4616290 
End bp4617414 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content66% 
IMG OID640583749 
Producthypothetical protein 
Protein accessionYP_001264673 
Protein GI148557091 
COG category[S] Function unknown 
COG ID[COG3535] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0569866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0852747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACATCA TCAATTCACC GCGCGACGTC CAGGACATGG CCCGTGGCGC CGTCGTGCTG 
GGCACGGGCG GCGGCGGCGA TCCCTATATC GGCGAGCTGC TCGTGGCGGC GGAGGTCGCC
AACGGGAATT TCCCCAAGAT CATAAGCTGC GACGAGATCG GCGACGACGA TTTCGTGCTG
GTCTTTGCCG GCGTCGGCGC GCCTTCCATC CTGGTCGAGA ACCTGTTGAG CAAGACGGCG
ATGCTGCGCG TGCTGGCCCG CGCCGAGGCG CATTTCGACC GGCGCGTGGA CGCCTTGCTC
TGCATGGAGA TCGGCGGCGC CAATTCGATG ATGCCGTTGG CGCTGGGGGC GATCAGCGGG
GTGCCCGTCC TCGATGCCGA CGGCATCGGC CGGGCGCTGC CGCAGCTGAA CATGACCACC
TTCAGCATCC ACGGCTGCCC GGTCACGCCG TCCATCCTCA TGGAGGAACG CGGCAACGTC
GTCACGATCG AGGCCTCCGA CGACAAGATG GCGGAGGATA TCTCGCGCGC CGCGACGATC
GCGATGGGCG CCGGCGCCTT CTGCATGATG TATCCGATGT CCGGCAAGCG CGCGCGCGAA
GTGACCATCC ACGGCACCAT CAGCCAGACG CTGGAGATCG GACGCGCCAT ACGCGAAGGC
CGCAACAGCC ATGGCGACCC CTTCGACAAT CTGCTGCGCT ATCTGAACAG CTGGCCCGAT
CGCACCGCGA AGATCATCTT CGACGGCAAG ATCGTCGACG TGACCCACGA GATCCGCAAC
GGCTGGCATT GGGGGCAGGC CCGGCTGCAA CCGCTGAACG GCGGCGGGGA CGATTGCGTC
ATCGAGATCC AGAACGAATT CACCATCGCC CGCATCAATG GCGAGACCGC GACGATCGTG
CCCGACCTGA TCACCGTGCT CGACCGCGAA TCCGCCGAGC CGCTGACATC CGACATGCTC
GCCTACGGCC AGCGCGTGAA GGTGCTCTCC TACAGTTGCG ACCCCGTGCT GCGCCGTCCC
GAGGCGCTCG ATGTCCTGGG GCCGCGCGCC TTCGGCTTCG ACGAGGACTT CCGGCCGATG
GAGGAGCTGC TCGGCCTCCG CGAGCCGCAG CAGGCCGTTG GCTGA
 
Protein sequence
MYIINSPRDV QDMARGAVVL GTGGGGDPYI GELLVAAEVA NGNFPKIISC DEIGDDDFVL 
VFAGVGAPSI LVENLLSKTA MLRVLARAEA HFDRRVDALL CMEIGGANSM MPLALGAISG
VPVLDADGIG RALPQLNMTT FSIHGCPVTP SILMEERGNV VTIEASDDKM AEDISRAATI
AMGAGAFCMM YPMSGKRARE VTIHGTISQT LEIGRAIREG RNSHGDPFDN LLRYLNSWPD
RTAKIIFDGK IVDVTHEIRN GWHWGQARLQ PLNGGGDDCV IEIQNEFTIA RINGETATIV
PDLITVLDRE SAEPLTSDML AYGQRVKVLS YSCDPVLRRP EALDVLGPRA FGFDEDFRPM
EELLGLREPQ QAVG