| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_4190 |
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| Symbol | |
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| ID | 5196662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 4610663 |
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| End bp | 4611421 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640583744 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001264668 |
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| Protein GI | 148557086 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0740528 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGGGA TCGCGCGGGG GGAAGACCGC GTCGCGCTGG TCACGGGAGG GGGCAGCGGA
CTTGGCGCCC ATATCGTCCG CGCCCTCCAT GCGGATGGCT ACAGGGTCCT GATTGGCGAT
GTCGCGATGG ACGGCGCCAA GGCGCTGGCG CGTGACCTGG ATGCGGGCGG GGAACGCGTC
AGGGCCGTCC CGCTGGACGT CCGCGACAAG CGCGCCTTTG TCGCCGTGGT GGAGGCGGCG
GCCGATTGGG GCGGCATCGA CGTGCTGGTC AACAACGCCG CGATCACGCC GACCACGCCC
GTCATGCTGA TCGAGCCCGA TGAGTTCGAC GCGGTGATGG CCGTCAATCT GCGGGGTCCC
TTTTTCGGCT GCCAGGTCGT CGGCGAACAT CTGCGGGGAC GCCGGGCGGG ACGGATCATC
AATATCGCCT CGCAGGCGGG ACAGATGGGC GGCACCGTGA CGGGCGCCCA TTATGCGGCG
GCGAAGGCGG CATTGATGCT GCTGACCAAA TTCTTCGCGC GGGAATTCGG CGGGACGGGG
ATCACCGTCA ATGCCGTGTC GCCGGGGGCG CTCGATCTGC CGGCGGTGCG CGCGGCGCTT
CCCGCCGAAC GGTTGCAGGC GATCGCCGCC GCCATGCCGT CCGGCCGGCT CGGTCATCCG
GAGGAGGTCG CGGCCGCGGT CTGCCTCCTC GCCTCCTCGT CCATGGGCTA CGTCACCGGG
GCGACCTGGG ACATCAACGG CGGGACTTTC ATGCGCTGA
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| Protein sequence | MIGIARGEDR VALVTGGGSG LGAHIVRALH ADGYRVLIGD VAMDGAKALA RDLDAGGERV
RAVPLDVRDK RAFVAVVEAA ADWGGIDVLV NNAAITPTTP VMLIEPDEFD AVMAVNLRGP
FFGCQVVGEH LRGRRAGRII NIASQAGQMG GTVTGAHYAA AKAALMLLTK FFAREFGGTG
ITVNAVSPGA LDLPAVRAAL PAERLQAIAA AMPSGRLGHP EEVAAAVCLL ASSSMGYVTG
ATWDINGGTF MR
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