Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_4173 |
Symbol | |
ID | 5196536 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 4590627 |
End bp | 4592918 |
Gene Length | 2292 bp |
Protein Length | 763 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640583727 |
Product | TonB-dependent receptor |
Protein accession | YP_001264651 |
Protein GI | 148557069 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000121747 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.086797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCGTC TAATTCTTCT GACTGGAGTG TCGATCATTG CCGTCCACGC CAGCACCGCT ATGGCGCAAG CCACGGGCAC GGACGTGGGG GCCGATGACC GGCTTTCCGA AATCGTCGTT ACCGCGGATC GCAACGAGCG GTCGCTGCAG GATGTCCCGA TCAGCATCAG CGCGTTCAGC GCCCAGGCGC TGGAAAAAAG CAATGTCACC GAAGCCAAGG ATTATCTGCA ATTTGCGCCG AACATCGTCT TCACCGAAGA CGGCGCGACG GGGCCGCGCA GCATCGACGT GGCCATTCGC GGCGTCGGCA ATATCAAGTC GTCCGATCTT GTCACGACGA GTTCGGCCAT CGGCTATTAC ATCGACGAGC TGAACGTCGG CGCCGTGGCC AATGGAACCA TCAATCCCCA GATGCTGGAC GTTGAGCGGA TAGAAGTCCT TCGTGGTCCG CAAGGCACGT ATTTTGGGCG CAATTCGCTC GGCGGCGCCG TGAGCATCAA TACGGTCCGG CCGAAGGACC GCTTCGAGGC TGAGGTCTCC GGCTCCTACG GAAGCTTCGA TACCTGGGAC TTCCGCGGTA TCCTGAACGT CCCGCTGGCG GAGGGCCTCT ATGTTCGTGG CGCCTATCTT CACAGCGAAA GCGGCGGAGT CGTAAAGAAC GTCAATCCCA ACGGCGCTCC CGACAGCGGC TATGTCGACA ACACCGCGCG CTTTGCCCTG CGAGCGGAGC CGGGCTCGGG GCTGACCATT GACGCGTCGC TGAGCTACAC CCGCGAAAAT GCCGGCCTGG ACGACACGGT GCCTTCGGGT GTTATCGACA ACGATACGAA GCAGACCCTC GGCAATGCCA ATCTCATGCC GATTTCCCAA GGGTTGGGCT TTTATCCCGA GAACCAGCGC CTCGTAAATC ACAACGCCCC GGAATATAAC CGCAATCGGT TCCTCATCGC CAATATGCGC GTTAAATATG AAGGCGAGCT TGTCGACCTG TCTTCCGTGA CCGGTTATCT ATACAGCCGT AATTCGCGAC TATTCGATCA GGACAATATC AGCGCGGATA TTTTCAATCG CGTGGTCAAG GGCCATACGA AATCCTACAG TCAGGAACTC CGTATCGCAT CGAAGCCGGG CAGTTCGTTC AAATGGACGT TCGGAGGGCT GGCGGCTCGG GACTATCTCG AACAGTTCTC GAACGTCTAT GTGGGATCGG CGCGGACCTA TACCGATCCG CTCACCGGCG TGACCACCCG ATATCTGCCG GATCGCTTTC CGGACGGTTT CCCGCTCAAC CAGCGTAACC GGACGAGCAA GGTCAACAGC TATGCGGTGT TCGGCGAAGG CGTGTACCGC CTCGGCCGAG TCTCGTTCAC GCTGGGCGCG CGATATACCC GCGACAAAGT GCAGGCGACC CAGTTCGGCG TTCTTGCTTC GAACGTGCCG TTGCCCGATG CGGGGGCCAG CAGCAGCTTC AACGACTTCT CCCCCCGACT GGTCGTCAAC TACGACGTGA ATGACGACGT CCACCTCTAC ACCTCCGTTT CGAGCGGGTA CAAAGCAGGC GGGGTCGATA TCAACCGCAG CGTCGTCCGC GCCTTCAAAC CGGAAAAGCT CTGGAGCTAT GAGGCGGGGT TCAAGACCCA GCTTCTCGAT CGCCGGCTCA GGGTCAACGG CGCGCTCTAC TATCTCGACT GGAAGAACAT CCAGGTCGTG AGCGCATTTC TCGCCGACCC GAACGACATC AGTTCGAGCA CCCAACTCAC GCTCAATGCT TCGAAAGCCA CGAGCAAGGG CGCCGAACTC GAAGTGCAGG CCTTGCCGAT GCGGGGGCTG CAACTGGGAT TGAACGCCGG ATATCTGGAC GCGAAATTCG GCGCCTTTCC CGACGCCGTG GTGTTCGGTG GCGGGCAGTT CGACCTGACC GGAAAGCGTG TGCCGAAATC GCCGAAATGG AACCTGAGCG GAAATGCGGA ATATGGCTTC GACCTGACCT CGTCCGCCGA TGCCTATGTT CGAGCGGAAG CCGTGTATCG CAGTTCGCTG GAGGGCAATC TCGATGCGAC GGCGGCACCG CTCCAGGGCC TTGCTCCCTT TCCCTACCTC TCCCCCTCCT ACACCGTCGT GAATGTGCGT GCCGGTCTGA ATGCCGGCCC TATCAGTGCG CAGGTCTTTG TGGAGAACCT CTTCAAGAAG GATTATTTCA GCGGCACTTA TGACCATTTC GGCCTGGCCG GCATTCGGCT GAAGCCACAC CCCCGCTTGT GGGGATTGCG CCTCACATGG AAAACCAACT GA
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Protein sequence | MVRLILLTGV SIIAVHASTA MAQATGTDVG ADDRLSEIVV TADRNERSLQ DVPISISAFS AQALEKSNVT EAKDYLQFAP NIVFTEDGAT GPRSIDVAIR GVGNIKSSDL VTTSSAIGYY IDELNVGAVA NGTINPQMLD VERIEVLRGP QGTYFGRNSL GGAVSINTVR PKDRFEAEVS GSYGSFDTWD FRGILNVPLA EGLYVRGAYL HSESGGVVKN VNPNGAPDSG YVDNTARFAL RAEPGSGLTI DASLSYTREN AGLDDTVPSG VIDNDTKQTL GNANLMPISQ GLGFYPENQR LVNHNAPEYN RNRFLIANMR VKYEGELVDL SSVTGYLYSR NSRLFDQDNI SADIFNRVVK GHTKSYSQEL RIASKPGSSF KWTFGGLAAR DYLEQFSNVY VGSARTYTDP LTGVTTRYLP DRFPDGFPLN QRNRTSKVNS YAVFGEGVYR LGRVSFTLGA RYTRDKVQAT QFGVLASNVP LPDAGASSSF NDFSPRLVVN YDVNDDVHLY TSVSSGYKAG GVDINRSVVR AFKPEKLWSY EAGFKTQLLD RRLRVNGALY YLDWKNIQVV SAFLADPNDI SSSTQLTLNA SKATSKGAEL EVQALPMRGL QLGLNAGYLD AKFGAFPDAV VFGGGQFDLT GKRVPKSPKW NLSGNAEYGF DLTSSADAYV RAEAVYRSSL EGNLDATAAP LQGLAPFPYL SPSYTVVNVR AGLNAGPISA QVFVENLFKK DYFSGTYDHF GLAGIRLKPH PRLWGLRLTW KTN
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